Pairwise Alignments

Query, 174 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 584 a.a., Tetratricopeptide TPR_2 repeat protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 45.8 bits (107), Expect = 1e-09
 Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 6/123 (4%)

Query: 45  KAIEYYEKAIKL----NPDDANAISFLGTLYDGEGDREKAYEYLTKALEMEPKNPWMYYN 100
           +A E Y+ AI +      DD       G  ++  GD ++A   L +ALE+ P  P +   
Sbjct: 397 EAAEAYDAAIAIAEAQGQDDWVLYYARGIAHERIGDWDEAEVDLRRALELNPGQPMVLNY 456

Query: 101 LGLYYLNHDDNM--AIGCFEKALRIDPENECCWSQLGYTYYDIGDYTNSKLNFEKAYEIN 158
           LG  ++   +NM  A+   E+A+   P+N      LG+  Y +  Y  +    E+A  + 
Sbjct: 457 LGYSFVEMGENMDEALAMIEEAVAARPDNGYITDSLGWVLYRMERYEEAVPLMERAVALE 516

Query: 159 PKD 161
           P D
Sbjct: 517 PLD 519



 Score = 44.7 bits (104), Expect = 3e-09
 Identities = 29/131 (22%), Positives = 67/131 (51%), Gaps = 4/131 (3%)

Query: 42  DNDKAIEYYEKAIKLNPDDANAISFLGTLYDGEGDR-EKAYEYLTKALEMEPKNPWMYYN 100
           D D+A     +A++LNP     +++LG  +   G+  ++A   + +A+   P N ++  +
Sbjct: 432 DWDEAEVDLRRALELNPGQPMVLNYLGYSFVEMGENMDEALAMIEEAVAARPDNGYITDS 491

Query: 101 LG--LYYLNHDDNMAIGCFEKALRIDPENECCWSQLGYTYYDIGDYTNSKLNFEKAYEIN 158
           LG  LY +   +  A+   E+A+ ++P +      LG  YY +     ++  +++A   +
Sbjct: 492 LGWVLYRMERYEE-AVPLMERAVALEPLDPIINDHLGDVYYAVNRKREAEFQWKRALSFD 550

Query: 159 PKDQYSDMIEK 169
           P+++ ++ I +
Sbjct: 551 PEEEDAERIRR 561



 Score = 40.4 bits (93), Expect = 6e-08
 Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 1/94 (1%)

Query: 36  FAYIGIDNDKAIEYYEKAIKLNPDDANAISFLGTLYDGEGDREKAYEYLTKALEMEPKNP 95
           F  +G + D+A+   E+A+   PD+      LG +       E+A   + +A+ +EP +P
Sbjct: 461 FVEMGENMDEALAMIEEAVAARPDNGYITDSLGWVLYRMERYEEAVPLMERAVALEPLDP 520

Query: 96  WMYYNLG-LYYLNHDDNMAIGCFEKALRIDPENE 128
            +  +LG +YY  +    A   +++AL  DPE E
Sbjct: 521 IINDHLGDVYYAVNRKREAEFQWKRALSFDPEEE 554