Pairwise Alignments

Query, 174 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 475 a.a., Tetratricopeptide TPR_2 repeat protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 35.0 bits (79), Expect = 2e-06
 Identities = 35/142 (24%), Positives = 58/142 (40%), Gaps = 4/142 (2%)

Query: 25  LEKSQEMAEIGFAYIGI---DNDKAIEYYEKAIKLNPDDANAISFLGTLYDGEGDREKAY 81
           +E     A +  A IG+   + + A  +Y KA++ +P +  A+  L  L+      E A 
Sbjct: 81  VEPGNTTAALMGAQIGVRGGNAEYAEAHYHKALQADPRNMRALMGLARLHGQNQKPEAAI 140

Query: 82  EYLTKALEMEPKNPWMYYNLG-LYYLNHDDNMAIGCFEKALRIDPENECCWSQLGYTYYD 140
           E L  ALE++P++  +   L  L         A      AL  +P ++    QL      
Sbjct: 141 EVLQTALEVDPQSARVRRQLATLLQRTEKTEEAKAQLRAALTANPNDQGASVQLANICMR 200

Query: 141 IGDYTNSKLNFEKAYEINPKDQ 162
            GD   +    E A E  P ++
Sbjct: 201 AGDTAEAIQVLETALEAQPDNR 222



 Score = 32.0 bits (71), Expect = 2e-05
 Identities = 19/58 (32%), Positives = 28/58 (48%)

Query: 53  AIKLNPDDANAISFLGTLYDGEGDREKAYEYLTKALEMEPKNPWMYYNLGLYYLNHDD 110
           A+  NP+D  A   L  +    GD  +A + L  ALE +P N  +  +LG   L  +D
Sbjct: 180 ALTANPNDQGASVQLANICMRAGDTAEAIQVLETALEAQPDNRRLTMSLGRMRLRAED 237



 Score = 30.8 bits (68), Expect = 4e-05
 Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 5/87 (5%)

Query: 44  DKAIEYYEKAIKLNPDDANAISFLGTLYDGEGDREKAYEYLTKALEMEPKN---PWMYYN 100
           D+A    +  I+ +P D  A+         E   E+A  Y+ +ALE+EP N     M   
Sbjct: 35  DEARAELQMMIEADPQDTRAMMAFAMSLVREQRLEEAAPYVERALEVEPGNTTAALMGAQ 94

Query: 101 LGLYYLNHDDNMAIGCFEKALRIDPEN 127
           +G+   N +   A   + KAL+ DP N
Sbjct: 95  IGVRGGNAE--YAEAHYHKALQADPRN 119