Pairwise Alignments

Query, 272 a.a., imidazole glycerol phosphate synthase subunit HisF from Methanococcus maripaludis S2

Subject, 256 a.a., 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase from Synechococcus elongatus PCC 7942

 Score = 79.7 bits (195), Expect = 6e-20
 Identities = 58/225 (25%), Positives = 110/225 (48%), Gaps = 29/225 (12%)

Query: 6   IIPCLDIKEGRVVK--GTNFVELRDAG-DPVELSKIYNEQGADELVFLDITASFEKRDII 62
           +IP +D+  G+ V+    ++ +    G DPV ++  + E GA  L  +D+  + E   + 
Sbjct: 3   VIPAIDLLGGQCVRLFQGDYDQAEVYGKDPVGMALRWAEAGAQRLHLVDLDGAKEGSPVN 62

Query: 63  IDVVKRTAEQVFIPLTVGGGIKTVDDFRKILRAGADKISINTSAVKTPDLIKEASEIFGT 122
            + +   A+++ IP+ VGGG++  D   ++L +G ++  + T AV+ P L++  +  F  
Sbjct: 63  AEAIATIAQRLSIPVQVGGGLRDRDTVARLLDSGVERAILGTVAVERPALVEALAGEFPG 122

Query: 123 QCVVVAMDVKRKYITDSQDENLKNKNIFETKLGSCWFEVYIYGGREGTGIDAIEWAKKVE 182
           Q + V +D +                           +V   G  E +G+ A+  A+++ 
Sbjct: 123 Q-IAVGIDARSG-------------------------KVATRGWLEDSGLTAVALAQQMA 156

Query: 183 YLGAGEILLTSMDADGTKDGYDLVLTKAISENTKLPIIASGGCGN 227
            LGA  ++ T +  DGT  G +L   +AI+    +P+IASGG G+
Sbjct: 157 DLGACALICTDIGRDGTLQGPNLEELRAIAAAVSIPVIASGGVGS 201



 Score = 28.1 bits (61), Expect = 2e-04
 Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 13/105 (12%)

Query: 160 EVYIYGGREGTGIDAIEWAKKVEYLGAGEILLTSMDADGTKDG--YDLVLTKAISENTKL 217
           EVY   G++  G+ A+ WA+      AG   L  +D DG K+G   +      I++   +
Sbjct: 26  EVY---GKDPVGM-ALRWAE------AGAQRLHLVDLDGAKEGSPVNAEAIATIAQRLSI 75

Query: 218 PIIASGGCGNANHVVDAFTEGKADAALMASILHYRECTVNDLKKE 262
           P+   GG  + + V      G  + A++ ++   R   V  L  E
Sbjct: 76  PVQVGGGLRDRDTVARLLDSG-VERAILGTVAVERPALVEALAGE 119



 Score = 26.6 bits (57), Expect = 6e-04
 Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 1/77 (1%)

Query: 26  LRDAG-DPVELSKIYNEQGADELVFLDITASFEKRDIIIDVVKRTAEQVFIPLTVGGGIK 84
           L D+G   V L++   + GA  L+  DI      +   ++ ++  A  V IP+   GG+ 
Sbjct: 141 LEDSGLTAVALAQQMADLGACALICTDIGRDGTLQGPNLEELRAIAAAVSIPVIASGGVG 200

Query: 85  TVDDFRKILRAGADKIS 101
           ++ D   +L   A  +S
Sbjct: 201 SLTDLLSLLPLEAQGVS 217