Pairwise Alignments

Query, 272 a.a., imidazole glycerol phosphate synthase subunit HisF from Methanococcus maripaludis S2

Subject, 247 a.a., 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) from Sinorhizobium meliloti 1021

 Score = 77.0 bits (188), Expect = 4e-19
 Identities = 56/230 (24%), Positives = 102/230 (44%), Gaps = 31/230 (13%)

Query: 6   IIPCLDIKEGRVVKGTNFVELRDAG----DPVELSKIYNEQGADELVFLDITASFEKRDI 61
           + P +D+K+G+ V+     ++  A     DP   ++ + EQG + L  +D+  +F    +
Sbjct: 3   LFPAIDLKDGQCVR-LKLGDMEQATVYNPDPAAQARAFEEQGFEWLHVVDLNGAFAGETV 61

Query: 62  IIDVVKRTAEQVFIPLTVGGGIKTVDDFRKILRAGADKISINTSAVKTPDLIKEASEIFG 121
               V    +    P+ +GGGI+T++     L  G  ++ + T AV+ P L+ EA   F 
Sbjct: 62  NGAAVDAILKATKNPVQLGGGIRTLEHIENWLSRGLKRVILGTVAVRDPALVIEACRKFP 121

Query: 122 TQCVVVAMDVKRKYITDSQDENLKNKNIFETKLGSCWFEVYIYGGREGTGIDAIEWAKKV 181
            + V V +D K                           +V + G  E + +  +E A+K 
Sbjct: 122 GR-VAVGIDAKGG-------------------------KVAVEGWAEASELGVVELARKF 155

Query: 182 EYLGAGEILLTSMDADGTKDGYDLVLTKAISENTKLPIIASGGCGNANHV 231
           E  G   I+ T +D DG   G +   T  +++   +P+IASGG  + + +
Sbjct: 156 EGAGVAAIIYTDIDRDGILTGINWASTLELADAVSIPVIASGGLASMDDI 205



 Score = 35.4 bits (80), Expect = 1e-06
 Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 4/97 (4%)

Query: 5   RIIPCLDIKEGRV-VKGTNFVELRDAGDPVELSKIYNEQGADELVFLDITASFEKRDIII 63
           R+   +D K G+V V+G  + E  + G  VEL++ +   G   +++ DI        I  
Sbjct: 123 RVAVGIDAKGGKVAVEG--WAEASELG-VVELARKFEGAGVAAIIYTDIDRDGILTGINW 179

Query: 64  DVVKRTAEQVFIPLTVGGGIKTVDDFRKILRAGADKI 100
                 A+ V IP+   GG+ ++DD R++    A K+
Sbjct: 180 ASTLELADAVSIPVIASGGLASMDDIRRMTEPDAQKL 216