Pairwise Alignments

Query, 272 a.a., imidazole glycerol phosphate synthase subunit HisF from Methanococcus maripaludis S2

Subject, 245 a.a., 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (RefSeq) from Shewanella amazonensis SB2B

 Score = 70.1 bits (170), Expect = 4e-17
 Identities = 59/248 (23%), Positives = 108/248 (43%), Gaps = 24/248 (9%)

Query: 6   IIPCLDIKEGRVVK---GTNFVELRDAGDPVELSKIYNEQGADELVFLDITASFEKRDII 62
           IIP +D+ +G+VV+   G    +   + DP      Y + GA  L  +D+T + +     
Sbjct: 2   IIPAIDLIDGQVVRLFQGDYAKKTEFSLDPKNQLLSYQQDGAALLHLVDLTGAKDPDKRQ 61

Query: 63  IDVVKRTAEQVFIPLTVGGGIKTVDDFRKILRAGADKISINTSAVKTPDLIKEASEIFGT 122
             +++  A  +  PL VGGGI++  D   +L AG  ++ I + AVK+P+++    + +G 
Sbjct: 62  TKLIEEIAASLSTPLQVGGGIRSAADVDALLNAGVARVVIGSLAVKSPEVVLRLFDKYGG 121

Query: 123 QCVVVAMDVKRKYITDSQDENLKNKNIFETKLGSCWFEVYIYGGREGTGIDAIEWAKKVE 182
             + +A+DV      D+    +                V ++G ++G G           
Sbjct: 122 DAICLALDVN----IDADGNKM----------------VAVHGWQQGGGKSLESLVDTFM 161

Query: 183 YLGAGEILLTSMDADGTKDGYDLVLTKAISEN-TKLPIIASGGCGNANHVVDAFTEGKAD 241
             G    L+T +  DGT  G +  L   ++E   ++   ASGG    + V    T G + 
Sbjct: 162 PAGLKHALVTDISRDGTMTGANTALYCELAERFNEVQWQASGGVATLDDVKAVKTSGASG 221

Query: 242 AALMASIL 249
             +  ++L
Sbjct: 222 IIIGKALL 229



 Score = 23.9 bits (50), Expect = 0.004
 Identities = 12/36 (33%), Positives = 19/36 (52%)

Query: 81  GGIKTVDDFRKILRAGADKISINTSAVKTPDLIKEA 116
           GG+ T+DD + +  +GA  I I  + +      KEA
Sbjct: 203 GGVATLDDVKAVKTSGASGIIIGKALLTGVFSAKEA 238