Pairwise Alignments

Query, 272 a.a., imidazole glycerol phosphate synthase subunit HisF from Methanococcus maripaludis S2

Subject, 245 a.a., 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (RefSeq) from Shewanella loihica PV-4

 Score = 60.8 bits (146), Expect = 3e-14
 Identities = 61/257 (23%), Positives = 106/257 (41%), Gaps = 25/257 (9%)

Query: 6   IIPCLDIKEGRVVK---GTNFVELRDAGDPVELSKIYNEQGADELVFLDITASFEKRDII 62
           IIP +D+ EG+VV+   G    +      P+   + Y  QGA  L  +D+T + +     
Sbjct: 2   IIPAIDLIEGQVVRLYQGDYAQQTTFDLSPLAQLQAYQAQGATWLHIVDLTGAKDPDRRQ 61

Query: 63  IDVVKRTAEQVFIPLTVGGGIKTVDDFRKILRAGADKISINTSAVKTPDLIKEASEIFGT 122
             ++    E +   + VGGGI++    +++L  G  ++ I + AVK P+L++   E +G+
Sbjct: 62  TRLIGELVENLEANIQVGGGIRSEAQVKELLDLGVKRVVIGSLAVKQPELVQSWLETYGS 121

Query: 123 QCVVVAMDVKRKYITDSQDENLKNKNIFETKLGSCWFEVYIYGGREGTGIDAIEWAKKVE 182
             + +A+DV              N N    K+      V + G + G G           
Sbjct: 122 DAICLALDV--------------NINQAGEKI------VAVSGWQSGGGKTLESLVATFA 161

Query: 183 YLGAGEILLTSMDADGTKDGYDLVL-TKAISENTKLPIIASGGCGNANHVVDAFTEGKAD 241
             G    L+T +  DGT  G +  L  + ++    +   ASGG    +  V A     A 
Sbjct: 162 PYGLKHALVTDISRDGTLQGSNTQLYQEIVARYPDIEWQASGGIATLDD-VSAVRNSGAS 220

Query: 242 AALMASILHYRECTVND 258
             ++   L     TV +
Sbjct: 221 GIIIGKALLINNFTVQE 237



 Score = 23.9 bits (50), Expect = 0.004
 Identities = 12/36 (33%), Positives = 19/36 (52%)

Query: 81  GGIKTVDDFRKILRAGADKISINTSAVKTPDLIKEA 116
           GGI T+DD   +  +GA  I I  + +     ++EA
Sbjct: 203 GGIATLDDVSAVRNSGASGIIIGKALLINNFTVQEA 238