Pairwise Alignments

Query, 272 a.a., imidazole glycerol phosphate synthase subunit HisF from Methanococcus maripaludis S2

Subject, 238 a.a., 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase from Methanococcus maripaludis JJ

 Score =  109 bits (272), Expect = 6e-29
 Identities = 62/222 (27%), Positives = 123/222 (55%), Gaps = 28/222 (12%)

Query: 6   IIPCLDIKEGR---VVKGTNFVELRDAGDPVELSKIYNEQGADELVFLDITASFEKRDII 62
           +IP +D+K  +   +++G    +  +  +P E++K +  +GA+ L  +D+  + + + + 
Sbjct: 3   VIPAVDMKNKKCVQLIQGNPDKKHVELDNPPEIAKKWVNEGAEMLHLVDLDGALDGKRVN 62

Query: 63  IDVVKRTAEQVFIPLTVGGGIKTVDDFRKILRAGADKISINTSAVKTPDLIKEASEIFGT 122
            + ++   +   +P+ +GGGI++++D   ++  GA K+ I T AV+TP++IKE S+  G+
Sbjct: 63  DEFIEEIIKTSGVPVQIGGGIRSIEDAEYLVEKGAKKVIIGTIAVETPEIIKELSKRIGS 122

Query: 123 QCVVVAMDVKRKYITDSQDENLKNKNIFETKLGSCWFEVYIYGGREGTGIDAIEWAKKVE 182
           + ++V++D K                           +V I G +E T    ++  K +E
Sbjct: 123 EKIMVSLDAKDG-------------------------KVVIKGWKEKTKYTPVKIGKILE 157

Query: 183 YLGAGEILLTSMDADGTKDGYDLVLTKAISENTKLPIIASGG 224
            +GAG IL T++D++G  +G ++  TK + EN K+PI+ASGG
Sbjct: 158 EMGAGSILFTNVDSEGLLNGINIEPTKELVENLKIPIVASGG 199



 Score = 56.6 bits (135), Expect = 5e-13
 Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 4/117 (3%)

Query: 3   TKRIIPCLDIKEGRVV-KGTNFVELRDAGDPVELSKIYNEQGADELVFLDITASFEKRDI 61
           +++I+  LD K+G+VV KG    + +    PV++ KI  E GA  ++F ++ +      I
Sbjct: 122 SEKIMVSLDAKDGKVVIKGW---KEKTKYTPVKIGKILEEMGAGSILFTNVDSEGLLNGI 178

Query: 62  IIDVVKRTAEQVFIPLTVGGGIKTVDDFRKILRAGADKISINTSAVKTPDLIKEASE 118
            I+  K   E + IP+   GG+ T+DD  K+   G   + + ++  K    +KEA E
Sbjct: 179 NIEPTKELVENLKIPIVASGGVTTIDDLLKLKEIGVYGVVVGSAIYKNLINLKEAIE 235