Pairwise Alignments

Query, 157 a.a., GTP-binding protein from Methanococcus maripaludis S2

Subject, 492 a.a., ribosome biogenesis GTPase Der from Klebsiella michiganensis M5al

 Score = 47.4 bits (111), Expect = 3e-10
 Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 10/125 (8%)

Query: 7   IVVMGSEDVGKTTLMENLIKNVGKV--EHNGTTVAIDYGRIEMDDKKFHFFGTPG----- 59
           + ++G  +VGK+TL   L +    +  +  G T    YGR E++ ++F    T G     
Sbjct: 5   VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFICIDTGGIDGTE 64

Query: 60  ---QERFGFMREIAVEGADYALLVLDATVGLRKVDNDIINLLSTKNIPFSVFINKMDLCN 116
              + R      +A+E AD  L ++DA  GL   D+ I   L ++  P  +  NK D  +
Sbjct: 65  DGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADSAIAKHLRSREKPTFLVANKTDGID 124

Query: 117 ESNAV 121
              A+
Sbjct: 125 ADQAI 129



 Score = 45.8 bits (107), Expect = 1e-09
 Identities = 34/167 (20%), Positives = 76/167 (45%), Gaps = 16/167 (9%)

Query: 5   LKIVVMGSEDVGKTTLMENLIKNVGKVEHN--GTTVAIDYGRIEMDDKKFHFFGTPGQER 62
           +K+ ++G  +VGK+TL   ++     V ++  GTT    Y  ++ D++++    T G  +
Sbjct: 205 IKLAIVGRPNVGKSTLTNRILGEDRVVVYDMPGTTRDSIYIPMQRDEREYVLIDTAGVRK 264

Query: 63  FGFMREI-----------AVEGADYALLVLDATVGLRKVDNDIINLLSTKNIPFSVFINK 111
            G + ++           A+E A+  LLV+DA  G+   D  ++  +        + +NK
Sbjct: 265 RGKITDVVEKFSVIKTLQAIEDANVVLLVIDAREGISDQDLSLLGFILNSGRSLVIVVNK 324

Query: 112 MDLCNESNAVEIINNLN---GLIESSNIVTGSIYRKEGLSEIMDQLK 155
            D  ++    ++   L+   G I+ + +   S     G+  + + ++
Sbjct: 325 WDGLSQEVKEQVKETLDFRLGFIDFARVHFISALHGSGVGNLFESVR 371