Pairwise Alignments

Query, 296 a.a., LysR family transcriptional regulator from Methanococcus maripaludis S2

Subject, 308 a.a., LysR family transcriptional regulator PA3398 from Pseudomonas fluorescens FW300-N1B4

 Score =  103 bits (256), Expect = 6e-27
 Identities = 80/283 (28%), Positives = 136/283 (48%), Gaps = 8/283 (2%)

Query: 9   QTFLFAAKTKSFSKAAKKLGVTQGTVSNHISVLEKFFDAQLFLRTPEGVDLTTEGNILYE 68
           Q F+  A+ +S S+AA  L ++Q   S  I+ LE+    QLF R  + + L   G  L  
Sbjct: 9   QVFVAVAQQESVSRAALTLNLSQSAASTSITELERQCSCQLFDRAGKRLSLNALGKQLLP 68

Query: 69  NAEKLLENISNAKQQMRILH-EHPEGLIRIAASTTPGEHLLPSIIKDYTKVYRDVSFQIQ 127
            A  LL+    AK+   +L+ +   G + + A+ T G +L   +I  + + + +   ++ 
Sbjct: 69  QAVALLDQ---AKEIEDLLNGKSGFGSLAVGATLTIGNYLATLLIGSFMQRHPESQVKLH 125

Query: 128 ITDSEKCFKLLEDRAVDI-IAVGNIYDGSYESEVIGKDRLVLVVPPDHELAKKGVAKLSD 186
           + ++    + +    +D+ +  G+      E +   +D LV+   P H LAK+G+A + +
Sbjct: 126 VQNTANIVQQVAHYEIDLGLIEGDCSHPDIEVQSWVEDELVVFCAPQHPLAKRGIATMEE 185

Query: 187 ILKEDYIDREVGSGTREIFVDALQDKGYSMMDLHTIMSLGSNSSIITAVSEGYGISIISE 246
           +  E +I RE GSGTR  F  A++   +    L+  + L    +I  AV  G GI  IS 
Sbjct: 186 LSHEAWILREQGSGTRLTFDQAMR---HHRSALNIRLELEHTEAIKRAVESGLGIGCISR 242

Query: 247 IPAKKAADAGQLKIVPIEDLDLTRYMYLVKGKKPRNPSAIKSF 289
           +  + A   G L  V   DLDL R  Y +  K+    SA++ F
Sbjct: 243 LALRDAFRRGSLVPVETPDLDLARQFYFIWHKQKYQTSAMREF 285