Pairwise Alignments

Query, 296 a.a., LysR family transcriptional regulator from Methanococcus maripaludis S2

Subject, 323 a.a., ndhF3 operon transcriptional regulator from Synechococcus elongatus PCC 7942

 Score = 98.2 bits (243), Expect = 2e-25
 Identities = 73/286 (25%), Positives = 134/286 (46%), Gaps = 5/286 (1%)

Query: 9   QTFLFAAKTKSFSKAAKKLGVTQGTVSNHISVLEKFFDAQLFLRTPEGVDLTTEGNILYE 68
           + F  AA+  SF++AA++L +TQ TVS  +  L K     LF +  + + LT  G  LY+
Sbjct: 10  KVFEAAARHSSFTRAAEELYLTQPTVSIQVKQLTKAVGLPLFEQIGKRLYLTEAGRQLYK 69

Query: 69  NAEKLLENISNAKQQMRILHEHPEGLIRIAASTTPGEHLLPSIIKDYTKVYRDVSFQIQI 128
              ++ E +      +  L    +G +R+A  TT  ++ +P +I  + + Y  ++  +++
Sbjct: 70  TTRQVFEQLEQLDMTIADLQGMKQGQLRLAVITT-AKYFIPRLIGPFCQRYPGINVSLKV 128

Query: 129 TDSEKCFKLLEDRAVDIIAVGNIYDG-SYESEVIGKDRLVLVVPPDHELAKKGVAKLSDI 187
           T+ E     + D   D+  +     G     +    + LV+V P  H LA +    L  +
Sbjct: 129 TNHEGLINRINDNLDDLYVLSRPPSGFDITVQPFLDNPLVVVGPASHPLANQRGISLERL 188

Query: 188 LKEDYIDREVGSGTREIFVDALQDKGYSMMDLHTIMSLGSNSSIITAVSEGYGISIISEI 247
            +E +I RE GSGTRE             ++L+  + LGSN +I  A+  G G++++S  
Sbjct: 189 AQEPFILRERGSGTREATEQLFAAHN---LNLNVKLDLGSNEAIKQAILGGLGLAVLSYH 245

Query: 248 PAKKAADAGQLKIVPIEDLDLTRYMYLVKGKKPRNPSAIKSFWDFV 293
               A    +LK+  +E   + R  + V     +  +   +F D++
Sbjct: 246 TLTSAGATPELKMFEVEGFPIHRQWHAVYPAGKQLSTVAATFLDYL 291