Pairwise Alignments

Query, 296 a.a., LysR family transcriptional regulator from Methanococcus maripaludis S2

Subject, 302 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

 Score = 90.1 bits (222), Expect = 5e-23
 Identities = 71/293 (24%), Positives = 134/293 (45%), Gaps = 5/293 (1%)

Query: 1   MDPKISYFQTFLFAAKTKSFSKAAKKLGVTQGTVSNHISVLEKFFDAQLFLRTPEGVDLT 60
           M   +   + F   A++   SKAA+ LG+T    S  ++ LEK    +LF R    + L 
Sbjct: 1   MKMTLRQLEVFEAIARSGQVSKAAQWLGMTGPAASMALAELEKQLSVRLFERVGNRLRLN 60

Query: 61  TEGNILYENAEKLLENISNAKQQMRILHEHPEGLIRIAASTTPGEHLLPSIIKDYTKVYR 120
            +G  L   A +LL   S  +           G +++ ASTT G  LL      + + + 
Sbjct: 61  AQGAQLLPLATELLAQASKVEALFNASGAVLAGELKVGASTTIGNFLLAKAAVAFGQQHL 120

Query: 121 DVSFQIQITDSEKCFKLLEDRAVDI-IAVGNIYDGSYESEVIGKDRLVLVVPPDHELAKK 179
           D    + I ++    + + +  V++    G+  D   +     +D L +   P H LA +
Sbjct: 121 DALVDVSIHNTSAVIEQVANFEVELGFIEGHCVDRRLDVRAWHQDHLCVFCHPAHPLAGR 180

Query: 180 GVAKLSDILKEDYIDREVGSGTREIFVDALQDKGYSMMDLHTIMSLGSNSSIITAVSEGY 239
            V+ + ++ ++ ++ RE GSGTRE FV+A    G   +         +  +I  AV +G 
Sbjct: 181 KVS-VDEVRQQYWVLREEGSGTREHFVNAAHALG---LHPEARFCFSTADAIKLAVKQGA 236

Query: 240 GISIISEIPAKKAADAGQLKIVPIEDLDLTRYMYLVKGKKPRNPSAIKSFWDF 292
           G+ ++SE+  ++     +L ++ +  L +TR  +L++ K  ++ +   +F  F
Sbjct: 237 GLGVLSELALERELARRELALIEVTGLSITRPFFLIRHKSRQSTALANAFVQF 289