Pairwise Alignments

Query, 296 a.a., LysR family transcriptional regulator from Methanococcus maripaludis S2

Subject, 291 a.a., HTH-type transcriptional regulator, LysR family from Phaeobacter inhibens DSM 17395

 Score = 89.7 bits (221), Expect = 7e-23
 Identities = 82/293 (27%), Positives = 131/293 (44%), Gaps = 20/293 (6%)

Query: 8   FQTFLFAAKTKSFSKAAKKLGVTQGTVSNHISVLEKFFDAQLFLRTPEGVDLTTEGNILY 67
           F  F +  +  SFS AA +LGVTQ  V+ H++ LEK   +QL LR  EG+ LT  G   +
Sbjct: 8   FVAFAYVVREGSFSAAATRLGVTQSAVTQHVAKLEKQVGSQLLLRGREGIALTRTGQEFF 67

Query: 68  ENAEKLLENISNAKQQMRILHEHPEGLIRIAASTTPGEHLLPSI--IKDYTKVYRDVSFQ 125
           + A++L+   +   +++        G I+I A+       LP++  I  + + Y DV   
Sbjct: 68  DLADRLVALDTAISERLEGYDAMARGHIKIIANAP-----LPALKAISLFRQAYPDVEID 122

Query: 126 IQITDSEKCFKLLEDRAVDIIAVGNIYD----GSYESEVIGKDRLVLVVPPDHELAKKGV 181
             + D     +LL +R  D   VG I D    G +E   + + + V  V P   LA + +
Sbjct: 123 FALHDWTTATRLLRERRAD---VGLITDPPHIGDWERVPVQEAQYVAYVLPSSPLADRDM 179

Query: 182 AKLSDILKEDYIDREVGSGTREIFVDALQDKGYSMMDLHTIMSLGSNSSIITAVSEGYGI 241
             L D+++E  I  E GS T  I  +AL + G         + + +   +  AV +G GI
Sbjct: 180 LHLRDLVRETIILPESGSLTERIVREALVEHG---THFQRTIKMTTFPLMCEAVLQGAGI 236

Query: 242 SIISEIPAKKAADAGQLKIVPIEDLDLTRYMYLVKGKKPRNPSAIKSFWDFVS 294
           +I           +  L  VP+ +L       +V  K       +K+F D  S
Sbjct: 237 AIFL---GNSGLISRGLVEVPVAELSEPHETAVVAPKDRARLRLVKAFIDIAS 286