Pairwise Alignments

Query, 296 a.a., LysR family transcriptional regulator from Methanococcus maripaludis S2

Subject, 304 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score = 96.7 bits (239), Expect = 6e-25
 Identities = 82/277 (29%), Positives = 128/277 (46%), Gaps = 11/277 (3%)

Query: 4   KISYFQTFLF--AAKTKSFSKAAKKLGVTQGTVSNHISVLEKFFDAQLFLRTPEGVDLTT 61
           K S  Q  +F   A  +S S AA+KL +TQ  VS  +  LE      LF+R    + L+ 
Sbjct: 2   KYSLKQIMVFDAVASLESVSAAARKLSMTQSAVSMSLGQLENLLGRPLFIRQGNRLTLSH 61

Query: 62  EGNILYENAEKLLENISNAKQQMRILHEHP--EGLIRIAASTTPGEHLLPSIIKDYTKVY 119
            GN L   A +LL+   +A+Q    LHE     G  R+ +S T  EHLLP +I      +
Sbjct: 62  WGNWLRPRARRLLQ---DAQQIELGLHEQHLISGRFRLCSSQTAAEHLLPELISKIDTDF 118

Query: 120 RDVSFQIQITDSEKCFKLLEDRAVDI-IAVGNIYDGSYESEVIGKDRLVLVVPPDHELAK 178
            ++  ++ + ++E   + L +   D  I  G   D     E    D LV+V  P H  AK
Sbjct: 119 PELRIELTVENTENVVEGLLNYEYDFGIIEGRNDDSRLYQEQWLDDHLVVVASPHHPYAK 178

Query: 179 KGVAKLSDILKEDYIDREVGSGTREIFVDALQDKGYSMMDLHTIMSLGSNSSIITAVSEG 238
           +    L+ + +  ++ RE G+GTR IF  A+      +  LH        S +   V  G
Sbjct: 179 QTNISLAQLEQARWVLREQGAGTRRIFEGAIHG---VIEKLHVWKEYEHVSLLKALVKNG 235

Query: 239 YGISIISEIPAKKAADAGQLKIVPIEDLDLTRYMYLV 275
             +S +  +  +K   AG+L I+P   L++ R++  V
Sbjct: 236 PYLSSLPFLDVEKEVAAGELVILPTPQLNMQRHLSFV 272