Pairwise Alignments

Query, 296 a.a., LysR family transcriptional regulator from Methanococcus maripaludis S2

Subject, 304 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score = 90.1 bits (222), Expect = 6e-23
 Identities = 71/295 (24%), Positives = 140/295 (47%), Gaps = 13/295 (4%)

Query: 4   KISYFQTFLFAAKTKSFSKAAKKLGVTQGTVSNHISVLEKFFDAQLFLRTPEGVDLTTEG 63
           +I   + F    +  SF+KAA +LG++   VS ++S LE+    +L  RT   V++T  G
Sbjct: 5   RIDTMKAFTAVVQEGSFTKAADRLGLSSQLVSKYVSQLEEHLKVRLLNRTTRRVNVTEAG 64

Query: 64  NILYENAEKLLENISNAKQQMRILHEHPEGLIRIAASTTPGEHLLPSIIKDYTKVYRDVS 123
              +E  +++L +I      +  L E   GL++++A  + G H LPS +  + + + DV 
Sbjct: 65  RAYFERCQQVLIDIEEMDNALTNLSETASGLLKVSAPMSFGIHHLPSALVQFQQQHPDVR 124

Query: 124 FQIQITDSEKCFKLLEDRAVDIIAVGNIYDGSYESEVIGKDRLVLVVPPDHELAKKGVAK 183
             I +TD  K   LLED     + +G +   S  ++ +   +LV+   P++ LA++G  K
Sbjct: 125 LDITLTD--KKVDLLEDGVDVALRIGQLTSSSLIAKKLTPIKLVVCASPEY-LAERGEPK 181

Query: 184 L-SDILKEDYID---REVGSGTREIFVDALQDKGYSMMDLHTIMSLGSNSSIITAVSEGY 239
             +D++  +Y+     ++G+            + +S + + + ++  +   ++ A   G 
Sbjct: 182 TPADLIHHNYLHFSYSDLGAAFGRF------GEHFSALKIPSDLACNNGDMLVEAAIAGR 235

Query: 240 GISIISEIPAKKAADAGQLKIVPIEDLDLTRYMYLVKGKKPRNPSAIKSFWDFVS 294
           GI +       KA  +G+LK +  +       +Y V   +    S ++ F D +S
Sbjct: 236 GIVVQPTFLVSKALRSGKLKAILTDYTPEPFGLYAVYVHRKFLASKVRCFVDALS 290