Pairwise Alignments

Query, 296 a.a., LysR family transcriptional regulator from Methanococcus maripaludis S2

Subject, 299 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  100 bits (250), Expect = 3e-26
 Identities = 78/285 (27%), Positives = 137/285 (48%), Gaps = 5/285 (1%)

Query: 11  FLFAAKTKSFSKAAKKLGVTQGTVSNHISVLEKFFDAQLFLRTPEGVDLTTEGNILYENA 70
           F   A++   +KAA+++ ++    S  ++ LEK  +A+LF R    + L ++GN+L   A
Sbjct: 11  FEAVARSGQVAKAAEQVNLSPPATSMALAELEKQLNARLFERIGNRLQLNSQGNLLLPLA 70

Query: 71  EKLLENISNAKQQMRILHEHPEGLIRIAASTTPGEHLLPSIIKDYTKVYRDVSFQIQITD 130
             LL  +   +Q          G + ++AS+T G +LL      + + +     ++ IT+
Sbjct: 71  ADLLHRVEQIEQAFTPQGGDLVGQLSVSASSTIGNYLLAKAAVAFCQQHTQTHVEVAITN 130

Query: 131 SEKCFK-LLEDRAVDIIAVGNIYDGSYESEVIGKDRLVLVVPPDHELAKKGVAKLSDILK 189
           ++   + + + RA      G+  D     E   KDRL++   P H LA + V   + +  
Sbjct: 131 TQDVIQSVAQFRAEMGFIEGHCTDNRLHIEPWHKDRLLVFCHPAHPLAGQTVKSFA-VKG 189

Query: 190 EDYIDREVGSGTREIFVDALQDKGYSMMDLHTIMSLGSNSSIITAVSEGYGISIISEIPA 249
           + ++ RE GSGTRE FV+A  + G   M   +     +  +I  AV +G G+ ++SE+  
Sbjct: 190 QSWVLREEGSGTREYFVNAANELG---MQPESKFCFTTPDAIKLAVKQGAGLGVLSELAL 246

Query: 250 KKAADAGQLKIVPIEDLDLTRYMYLVKGKKPRNPSAIKSFWDFVS 294
           +K     +L +V IE L L R  Y +  K  +  S   +F  F S
Sbjct: 247 EKEISRKELALVTIEGLVLERQFYRITHKSRQATSLGLAFVQFCS 291