Pairwise Alignments

Query, 533 a.a., sodium:solute symporter family protein from Methanococcus maripaludis S2

Subject, 494 a.a., L-proline:Na+ symporter (from data) from Pseudomonas stutzeri RCH2

 Score =  181 bits (459), Expect = 6e-50
 Identities = 132/472 (27%), Positives = 223/472 (47%), Gaps = 43/472 (9%)

Query: 8   VIVLIYLLVIGYLGYKGWKGTSSAEDYMVGGRKIHPFVMAMSYGATFISTAAIVGFGGFS 67
           +  LIY+  +  +G+  ++ T + +DY++GGR +  FV A+S GA+ +S   ++G  G  
Sbjct: 9   ITFLIYIAAMILIGFVAYRATKNFDDYILGGRSLGSFVTALSAGASDMSGWLLMGLPGAI 68

Query: 68  GLFGMSLLWLTFLNIFLGIFIAFVFFGKRTR-KMGHNLNALTFPELLAKRFE--SKFIQW 124
            + G+S  W+  + + +G ++ ++F   R R    HN NALT P+  + RFE  S+ ++ 
Sbjct: 69  FVAGLSESWIA-IGLIVGAWLNWLFVAGRLRVHTEHNHNALTLPDYFSHRFEDESRMLRI 127

Query: 125 FSGLLIFCAMPIYAAAVLIGAARFIETTLNISFDVALLVFSIIIAVYVVMGGLKGVMYTD 184
           FS L+I     IY A+ ++  AR  E++  + ++ AL + +    +YV +GG   V +TD
Sbjct: 128 FSALVILVFFTIYCASGVVAGARLFESSFGVPYEYALWIGAAATILYVFIGGFLAVSWTD 187

Query: 185 AFQGTIMFFGMLFLLYMTYDILGGVTTAHQAISNMSGLVPANLASVGHAGWTSMPTFGSP 244
             Q T+M F +L         LG +  A   I+  +   PA           +   F   
Sbjct: 188 TVQATLMIFALLITPVFVILALGDMGAAMDTIATQN---PA-----------AFDMFSGL 233

Query: 245 MWWTIVSSIILGVGIGVLAQPQLIVRFMTVKSNRELNRAVLIGAVFILIATGTAYVVGTL 304
            +  I+S  +L  G+G   QP ++VRFM   S + +  A  IG  ++++    A  VG  
Sbjct: 234 SFVAIIS--LLAWGLGYFGQPHILVRFMAADSIKTIPNARRIGMAWMILTLAGAVAVGFF 291

Query: 305 SNVYFMNTEGVLSIGATVSEAFPTGNSDSIMPLYINKAMPEWFIYIFLVSLLAAAMSTIS 364
              YF    G       VS+     N + +    +      W   I L  +LAA MST+S
Sbjct: 292 GIAYF---AGHPEQAGAVSQ-----NGERVFMELVKILFNPWVAGIILSGVLAAVMSTLS 343

Query: 365 SQFHAQGTSIGRDVYETICGKKGLNSVII-TRLGIIVAIVIAAILGYILPGGIVARGTAL 423
           +Q     +++ +D Y+ +  K    + ++    G+++ I + AI       GI +   + 
Sbjct: 344 AQLLVSSSALTQDFYKAMLRKSASQTELVWVGRGMVLLIALIAI-------GIASNPESK 396

Query: 424 FFGLCS-------AAFLPAYALGLFWKRTTKEGAIAGLLTGTFVSLFCLVFI 468
             GL S       AAF P   + L WKR T+ GA+AG+L G    +    FI
Sbjct: 397 VLGLVSYAWAGFGAAFGPVVLISLLWKRMTRNGALAGMLVGAVTVVVWKEFI 448