Pairwise Alignments

Query, 533 a.a., sodium:solute symporter family protein from Methanococcus maripaludis S2

Subject, 494 a.a., sodium/proline symporter from Pseudomonas stutzeri RCH2

 Score =  181 bits (460), Expect = 4e-50
 Identities = 139/476 (29%), Positives = 225/476 (47%), Gaps = 46/476 (9%)

Query: 4   LLLNVIVLIYLLVIGYLGYKGWKGTSSAEDYMVGGRKIHPFVMAMSYGATFISTAAIVGF 63
           L+  VI +  +++IG++ Y+  K  S   DY++GGR +  FV A+S GA+ +S   ++G 
Sbjct: 8   LITFVIYIAAMILIGFIAYRATKNFS---DYILGGRSLGSFVTALSAGASDMSGWLLMGL 64

Query: 64  GGFSGLFGMSLLWLTFLNIFLGIFIAFVFFGKRTR-KMGHNLNALTFPELLAKRFE--SK 120
            G   + G+S  W+  + + +G ++ ++F   R R    HN NALT P+  + RFE  S+
Sbjct: 65  PGAIFVAGLSESWIA-IGLIVGAWLNWLFVAGRLRVHTEHNHNALTLPDYFSHRFEDESR 123

Query: 121 FIQWFSGLLIFCAMPIYAAAVLIGAARFIETTLNISFDVALLVFSIIIAVYVVMGGLKGV 180
            ++ FS L+I     IY A+ ++  AR  E+T  + ++ AL V +    +YV +GG   V
Sbjct: 124 MLRIFSALVILVFFTIYCASGVVAGARLFESTFGMPYEYALWVGAAATILYVFIGGFLAV 183

Query: 181 MYTDAFQGTIMFFGMLFLLYMTYDILGGVTTAHQAISNMSGLVPANLASVGHAGWTSMPT 240
            +TD  Q T+M F +L         LG + TA   I   +   PAN              
Sbjct: 184 SWTDTVQATLMIFALLVTPVFVILALGDMGTAMATIEAQN---PAN-----------FDM 229

Query: 241 FGSPMWWTIVSSIILGVGIGVLAQPQLIVRFMTVKSNRELNRAVLIGAVFILIATGTAYV 300
           F    +  IVS  +L  G+G   QP ++VRFM   S + +  A  IG  ++++    A  
Sbjct: 230 FRGLSFVAIVS--LLAWGLGYFGQPHILVRFMAADSIKTIPNARRIGMTWMILTLAGAVA 287

Query: 301 VGTLSNVYFMNTEGVLSIGATVSEAFPTGNSDSIMPLYINKAMPEWFIYIFLVSLLAAAM 360
           VG L   YF +          VS+     N + +    +      W   I L  +LAA M
Sbjct: 288 VGFLGIAYFADHP---EQAGAVSQ-----NGERVFMELVKILFNPWVAGIILSGVLAAVM 339

Query: 361 STISSQFHAQGTSIGRDVYETICGKKGLNSVII-TRLGIIVAIVIAAILGYILPGGIVAR 419
           ST+S+Q     +++ +D Y+ +  K    + ++    G+++ I + AI       GI + 
Sbjct: 340 STLSAQLLVSSSALTQDFYKAMLRKNASQTELVWVGRGMVLLIALIAI-------GIASN 392

Query: 420 GTALFFGLCS-------AAFLPAYALGLFWKRTTKEGAIAGLLTGTFVSLFCLVFI 468
             +   GL S       AAF P   + L WKR T+ GA+ G+L G    +    FI
Sbjct: 393 PDSKVLGLVSYAWAGFGAAFGPVVLISLLWKRMTRNGALVGMLVGAVTVVVWKEFI 448