Pairwise Alignments

Query, 533 a.a., sodium:solute symporter family protein from Methanococcus maripaludis S2

Subject, 559 a.a., Na+/solute symporter (NCBI) from Rhodospirillum rubrum S1H

 Score =  108 bits (271), Expect = 4e-28
 Identities = 118/529 (22%), Positives = 217/529 (41%), Gaps = 63/529 (11%)

Query: 6   LNVIVLIYLLVIGYLGYKGW--KGTSSAEDYMVGGRKIHPFVMAMSYGATFISTAAIVGF 63
           +  I +    VIG L    W  + T SA+D+   G  I  F   ++    ++S A+ +G 
Sbjct: 41  VTAIAMFVAFVIGTLFITYWAARRTKSAKDFYAAGGGITGFQNGLAIAGDYMSAASFLGI 100

Query: 64  GGFSGLFGMSLLWLTFLNIFLGIFIAFVFFGKRTRKMGHNLNALTFPELLAKRFESKFIQ 123
            G     G   L +  +   +G  +      +R R    NL   TF ++ + R     I+
Sbjct: 101 AGLVFTSGFDGL-IYSIGFLVGWPVIMFLVAERLR----NLGKYTFADVASFRLGQGPIR 155

Query: 124 WFSGLLIFCAMPIYAAAVLIGAARFIETTLNISFDVALLVFSIIIAVYVVMGGLKGVMYT 183
             +       + +Y  A ++GA + IE    + +  A+++  +++  YV+ GG+    + 
Sbjct: 156 SMAASGTLVVVILYLIAQMVGAGKLIELLFGLDYSTAVVLVGVLMVSYVMFGGMLATTWV 215

Query: 184 DAFQGTIMFFGMLFLLYMTYDILGGVTTAHQAISNMSGLVPANLASVGHAGWTSMPTFGS 243
              +  ++  G  F+  M     G    A  A +         L + G  G  S P    
Sbjct: 216 QIIKAVLLLSGASFMAIMVLVSFGFSPEALFAKAVEVHAKKTLLMAPG--GLVSDP---- 269

Query: 244 PMWWTIVSSIILGVGI--GVLAQPQLIVRFMTVKSNRELNRAV-----LIGAVFIL-IAT 295
                 + +I LG+ +  G    P +++RF TV   +E  ++V      IG  +IL    
Sbjct: 270 ------IDAISLGIALMFGTAGLPHILMRFFTVSDAKEARKSVFYATGFIGYFYILTFII 323

Query: 296 GTAYVVGTLSNVYFMNTEGVLSIG----ATVSEAFPTGNSDSIMPLYINKAMPEWFIYIF 351
           G   +V  L+   FM  +G    G    A +  A   G +                I++ 
Sbjct: 324 GFGAIVMVLNQPEFMAADGKGIAGGSNMAAIHLAHAVGGN----------------IFLG 367

Query: 352 LVSLLAAA--MSTISSQFHAQGTSIGRDVYETICGKKGL---NSVIITRLGIIVAIVIAA 406
            +S +A A  ++ +S    +  +++  D+Y ++  K  +   + + ++++  +   V+A 
Sbjct: 368 FISAVAFATILAVVSGLTLSGASAVSHDLYASVWRKGRVSERDEIRVSKITTVGLGVVAI 427

Query: 407 ILGYILPGGIVARGTALFFGLCSAAFLPAYALGLFWKRTTKEGAIAGLLTGTFVSLFCLV 466
           +LG       +A    L F + ++A  P   + +FWK  T  GA  G   G  +S   LV
Sbjct: 428 LLGIAFESQNIAFMVGLAFAIAASANFPILFMSMFWKGLTTRGAFIGGFAG-LISATVLV 486

Query: 467 FIHQAESAALGISKMLIGRDVLISAMPWPYVDPMVISLPLAFIATVIVS 515
            +         I K ++G    I    +PY +P + S+PLAF+ T +VS
Sbjct: 487 ILGPP------IWKTVLGHPEAI----FPYSNPAIFSMPLAFLVTWLVS 525