Pairwise Alignments

Query, 533 a.a., sodium:solute symporter family protein from Methanococcus maripaludis S2

Subject, 483 a.a., sodium/proline symporter (RefSeq) from Shewanella loihica PV-4

 Score =  158 bits (400), Expect = 4e-43
 Identities = 121/463 (26%), Positives = 209/463 (45%), Gaps = 41/463 (8%)

Query: 1   MNILLLNVIVLI-YLLVIGYLGYKGWKGTSSAEDYMVGGRKIHPFVMAMSYGATFISTAA 59
           MNI L  ++    YL+++  +G   +K T S +DY++GGR + P V A+S GA+ +S   
Sbjct: 1   MNIELPILVTFFGYLILMMGIGLWAYKATDSVDDYILGGRSMGPAVTALSVGASDMSGWL 60

Query: 60  IVGFGGFSGLFGMSLLWLTFLNIFLGIFIAFVFFGKRTRKMGHNL-NALTFPELLAKRFE 118
           ++G  G   L G+   W+  + +  G ++ ++F  KR R       NALT P+   KRFE
Sbjct: 61  LLGLPGAVYLGGLGEAWIG-IGLVFGAWLNWLFVAKRLRIYTQFTDNALTLPDFFEKRFE 119

Query: 119 SK--FIQWFSGLLIFCAMPIYAAAVLIGAARFIETTLNISFDVALLVFSIIIAVYVVMGG 176
            K   ++  S + I      Y ++ ++G A   E    + +++ALL+ S II  Y  +GG
Sbjct: 120 DKQSVLKLVSAVTILVFFTFYTSSGMVGGAILFEKVFGLDYNLALLIGSGIIVAYTFVGG 179

Query: 177 LKGVMYTDAFQGTIMFFGMLFLLYMTYDILGGVTTAHQAISNMSGLVPANLASVGHAGWT 236
              V +TD FQG +M   +L +    +         H     M  L+  N   +G A   
Sbjct: 180 FFAVSWTDFFQGCLMLIALLIVPVTIFSQPETQNGIHSLDPAMLSLLSDNTTMIGLAS-- 237

Query: 237 SMPTFGSPMWWTIVSSIILGVGIGVLAQPQLIVRFMTVKSNRELNRAVLIGAVFILIATG 296
                            +L  G+G   QP ++ RFM + S  +L  +  I   ++++A  
Sbjct: 238 -----------------LLAWGLGYFGQPHILSRFMAIGSADDLKVSRRIAMSWMIVALM 280

Query: 297 TAYVVGTLSNVYFMNTEGVLSIGATVSEAFPTGNSDSIMPLYINKAMPEWFIYIFLVSLL 356
            A   G    +YF +               P  N ++I     + A   W   + + ++L
Sbjct: 281 GALATGLAGTLYFADQ--------------PIDNPETIFIHLAHAAFNPWIGGLLVAAIL 326

Query: 357 AAAMSTISSQFHAQGTSIGRDVYETICGKKGLNS--VIITRLGIIVAIVIAAILGYILPG 414
           +A MSTI SQ     + I  D Y+        +   ++I R+G++   VI+ ++      
Sbjct: 327 SAIMSTIDSQLLVCSSVITEDFYKKWLRPDASSKELMMIGRIGVLTIAVISGVIALNPES 386

Query: 415 GIVARGTALFFGLCSAAFLPAYALGLFWKRTTKEGAIAGLLTG 457
            +++  +  + G   AAF P   L LFW+  ++ GA+A ++ G
Sbjct: 387 SVLSLVSYAWAGF-GAAFGPVVILSLFWRGYSRNGAVATIIVG 428