Pairwise Alignments

Query, 533 a.a., sodium:solute symporter family protein from Methanococcus maripaludis S2

Subject, 519 a.a., SSS family solute/sodium (Na+) symporter (RefSeq) from Shewanella loihica PV-4

 Score = 95.9 bits (237), Expect = 3e-24
 Identities = 105/475 (22%), Positives = 199/475 (41%), Gaps = 50/475 (10%)

Query: 9   IVLIYLLVIGYLGYKGW------KGTSSAEDYMVGGRKIHPFVMAMSYGATFISTAAIVG 62
           I+L+Y L  G LG   W      +     +DY + G+ +  + +  S  A+ IS   I+G
Sbjct: 9   ILLVYAL--GLLGLALWISRQDKRHERDTKDYFLAGKALPWWAIGASLIASNISAEQIIG 66

Query: 63  FGGFSGLFGMSLLWLTFLNIFLGIFIAFVFFGKRTRKMGHNLNALTFPELLAKRFESKFI 122
             G     G+++    ++       I  +  GK    +       T P+ L +RF+ +  
Sbjct: 67  MSGSGYAIGLAIASYEWMAA-----ITLILVGKYMLPIFIKNEIYTMPQYLEQRFDKRVK 121

Query: 123 QWFSGLLIFCAMPIYAAAVLIGAARFIETTLNISFDVALLVFSIIIAVYVVMGGLKGVMY 182
              +   +   + +   AVL      IET   I +   ++  ++    Y + GGLK V Y
Sbjct: 122 TTLALFWLSVYILVNLTAVLWLGGLAIETVAGIDWLYGMVFLALFSLAYSLYGGLKAVAY 181

Query: 183 TDAFQGTIMFFGMLFLLYMTYDILGGVTTAHQAISNMSGLVPAN---LASVGHAGWTSMP 239
           TD  Q  ++ FG L L Y+  D +            +S  +P +   + S  +  + S+P
Sbjct: 182 TDIIQVVLLIFGGLLLSYLALDRVADGQGVLAGFDRLSSALPEHFEMILSQSNPHYMSLP 241

Query: 240 TFGSPMWWTIVSSIILGVGIGVLA----QPQLIVRFMTVKSNRELNRAVLIGAVFILIAT 295
                     +S ++ G+ I  ++       +I R +  KS  E  + +   A   L+  
Sbjct: 242 G---------ISVLVGGLWIMNISYWGFNQYIIQRALAAKSVAEAQKGIAFAAYLKLLMP 292

Query: 296 GTAYVVGTLSNVYFMNTEGVLSIGATVSEAFPTGNSDSIMPLYINKAMPEWFIYIFLVSL 355
               + G  + + +   E       +  +A+P     S+M L     MP     +   +L
Sbjct: 293 LIVVLPGIAAVLLYPGLE-------SPDQAYP-----SMMAL-----MPAGVKGLVFAAL 335

Query: 356 LAAAMSTISSQFHAQGTSIGRDVYETI-CGKKGLNSVIITRLGIIVAIVIAAILGYILPG 414
           +AA +S+++S  ++  T    D+Y  +   K   + V++ RL  +++++IA ++   L G
Sbjct: 336 VAAIVSSLASMTNSISTIFTMDIYAMLRPAKSEGHYVLVGRLSSLISLLIALVMAQPLLG 395

Query: 415 GIVARGTAL--FFGLCSAAFLPAYALGLFWKRTTKEGAIAGLLTGTFVSLFCLVF 467
                   +  F G+ +   +  +  G+FW+R T +GA+A  L G+ +  F L F
Sbjct: 396 EFEQAFQYIQEFTGVFTPGIVVIFLTGMFWRRATSQGALAAAL-GSAIFSFGLRF 449