Pairwise Alignments

Query, 533 a.a., sodium:solute symporter family protein from Methanococcus maripaludis S2

Subject, 489 a.a., sodium:solute symporter from Methanococcus maripaludis JJ

 Score =  201 bits (512), Expect = 4e-56
 Identities = 150/528 (28%), Positives = 253/528 (47%), Gaps = 51/528 (9%)

Query: 8   VIVLIYLLVIGYLGYKGWKGTSSAEDYMVGGRKIHPFVMAMSYGATFISTAAIVGFGGFS 67
           V + +Y+ +I  +     K      D+++GGR ++P++ A SYG  + S    +GF G  
Sbjct: 5   VFLAVYIAMIIGIATITKKRIKGVSDFLLGGRNVNPWMSAFSYGTAYFSAVIFIGFAGKM 64

Query: 68  GL-FGMSLLWLTFLNIFLGIFIAFVFFGKRTRKMGHNLNALTFPELLAKRFESKFIQWFS 126
           G  FG+  +W+   N  +G F+A+   GK+TR+M   L A T P  L KR++SK ++  +
Sbjct: 65  GWSFGIPTMWIVVGNTIIGSFLAWQVLGKKTREMTQRLGASTMPSFLEKRYKSKNLESLT 124

Query: 127 GLLIFCAMPIYAAAVLIGAARFIETTLNISFDVALLVFSIIIAVYVVMGGLKGVMYTDAF 186
             +IF  +  Y+A++  G   F+     IS   A ++ + + A+Y+  GG       D  
Sbjct: 125 AFIIFFFLVPYSASIYKG-LNFLFEGFGISPMNAYILMAALTAIYLYFGGFIAATLADFV 183

Query: 187 QGTIMFFGMLFLLYM--TYDILGGVTTAHQAISNMSGLVPANLASVGHAGWTSMPTFGSP 244
           QG IM  G+L +++   +   +GG       +SN+S + P  +  +  A +  +P  G  
Sbjct: 184 QGCIMVIGVLLMVFFLGSNPEVGGF---FGMLSNLSSIDPMLVTPINEASF--IPIMG-- 236

Query: 245 MWWTIVSSIILGVGIGVLAQPQLIVRFMTVKSNRELNRAVLIGAVFILIATGTAYVVGTL 304
                   + L   IG    PQ+I +F T+KS +    A  +   F  I T  A  +GT+
Sbjct: 237 --------LALLTSIGSWGLPQMIHKFYTIKSEKAAVSAKWVSTAFAFIITFGAAYIGTV 288

Query: 305 SNVYFMNTEGVLSIGATVSEAFPTGNSDSIMPLYINKAMPEWFIYIFLVSLLAAAMSTIS 364
           S V++ ++    + G T        + D I+P  +  A+P+W   + LV +++A+MST++
Sbjct: 289 SRVFYPDSASKAAAGLT--------SPDMIVPKIMEIALPDWVAALILVLVISASMSTLA 340

Query: 365 SQFHAQGTSIGRDVYE--TICGKKGLNSVIITRLGIIVAIVIAAILGYILPGGIVARGTA 422
           S   A  + +  D  +          N++I+ RL  ++ +V++ IL  I+P   V    A
Sbjct: 341 SLVLASSSVVSIDFVKGRLKTDLSDRNTMILMRLLCVLFVVLSFILA-IVPNSYVLSLMA 399

Query: 423 LFFGLCSAAFLPAYALGLFWKRTTKEGAIAGLLTGTFVSLFCLVFIHQAESAALGISKML 482
           L +GL S   L  Y LGL+WKRTTK+G  AG +T   V +F         +   GI+ + 
Sbjct: 400 LSWGLVSGCLLAPYFLGLYWKRTTKQGVWAG-ITSALVIMF-------GGAYYFGINSVY 451

Query: 483 IGRDVLISAMPWPYVDPMVISLPLAFIATVIVSLLTKAPSKEHLKKCF 530
           +           P V  + +  P+     + VSL+TK    EHL   F
Sbjct: 452 M-----------PAVGSLAMIAPI--FVVMAVSLITKPFESEHLDYIF 486