Pairwise Alignments

Query, 288 a.a., F420-non-reducing hydrogenase subunit from Methanococcus maripaludis S2

Subject, 300 a.a., F420-nonreducing hydrogenase from Methanococcus maripaludis JJ

 Score =  323 bits (827), Expect = 4e-93
 Identities = 160/293 (54%), Positives = 212/293 (72%), Gaps = 16/293 (5%)

Query: 5   VKVGIIQLCGCSGCHISLLDLHEGLLDVLPALEIVYAPIIADVKEIPD-VDVFLVEGGVR 63
           VK+    L  CSGCHISL+DLHE LL VL  +E+V++P++ DVKEIPD +DV L+EGG+R
Sbjct: 2   VKIATTWLACCSGCHISLVDLHEDLLKVLEQVELVHSPVLMDVKEIPDDIDVALIEGGIR 61

Query: 64  SEHDEHLIHEIREKSKVVIAWGSCAAFGGIPGLGNMYTPEQLKETVY-TTVSTDNP-GVI 121
           +E + H+  E+R+K+K+VIA+G+CA +GGIPG+GN+Y+ E L E  Y TT ST N  G+I
Sbjct: 62  NEENLHIAQEMRKKAKIVIAFGTCAVYGGIPGMGNLYSNEALLEKAYKTTFSTKNEEGII 121

Query: 122 PTEGVPELTTEVRAISDVVKADYVIPGCPPKPALTAGAIVALLEGKDPVLPTKIVCDECP 181
           P+E VPELT+ V+ +SDV+  DY++PGCPPKP L AG + +LLEGK P L TK +C+ CP
Sbjct: 122 PSEDVPELTSRVKPLSDVIDVDYILPGCPPKPELIAGVLTSLLEGKTPELTTKNMCEVCP 181

Query: 182 R--TKENVFPKEFKRSFEGTPDPEKCLFEQGYTCMGMATRAGCGAMCPSANMPCRGCYGK 239
           R  +KE V     KR++EGTPDP+KCL EQGY CMG+ATRA CGA+CP+A +PC GCYG 
Sbjct: 182 REKSKEGVSIDSIKRNYEGTPDPKKCLLEQGYLCMGIATRASCGAICPTAGVPCTGCYGP 241

Query: 240 TDETLDQGA----AAANTY-------ANAGEAALEIPDKVATLNRFTLPVALV 281
           TD+ +DQGA    A A+ Y        +  E   +I DKV +  +FTLP AL+
Sbjct: 242 TDKVVDQGAKMVSALASDYKIDEDRTMDPNELPKQILDKVGSFYKFTLPSALI 294