Pairwise Alignments

Query, 418 a.a., Ni/Fe hydrogenase subunit alpha from Methanococcus maripaludis S2

Subject, 570 a.a., Ni,Fe-hydrogenase I large subunit from Dechlorosoma suillum PS

 Score = 89.0 bits (219), Expect = 3e-22
 Identities = 134/534 (25%), Positives = 209/534 (39%), Gaps = 137/534 (25%)

Query: 3   KVTIEPLSRLEGHGKVSITLDDAGKPTDVKLHITALRGFEQFVVGRPAEEVPRIVPRICG 62
           +VTI+P++R+EGH +V + ++  GK T         RG E  ++GR   +   I  RICG
Sbjct: 4   RVTIDPVTRIEGHLRVDVEVN-GGKVTKAWSSGQMWRGVENILIGRDPRDAWAITQRICG 62

Query: 63  ICQTPHHLASVKAVDAAWGAEVPSAAEKLRELMHLGNMMHSHALHFYYLAAPDFV----- 117
           +C T H + SV+AV+ A   E+P  A+ +R ++   + +H   +HFY+L+A D+V     
Sbjct: 63  VCTTVHAICSVRAVEDALKLEIPVNAQYIRNMIITAHNLHDSIVHFYHLSALDWVDVVSA 122

Query: 118 LGPDSDPAA---------------------RNIIGVIGAA------------------PE 138
           L  D D A+                       I G +                     PE
Sbjct: 123 LQADPDKASALAESLSPWNRNGKHEFRKVKEKIAGFVKTGQLGIFTNGYWGHPAMKLPPE 182

Query: 139 VAKKAIA-------MRRVGQSIVETIGGRAIHPVTGVPGGVSKALSEEKRD--------- 182
           V   A+A       ++R    IV  +G ++ H      GGV+  L+ + +          
Sbjct: 183 VNLIAVAHYLQALEIQRFASKIVSVLGSKSPHIQNVAVGGVANPLAVDSQSVLTVERLLA 242

Query: 183 --ELLNEIDEMI--AYGQDGIALIKSLNEKYMDLAKTLGVIDTWYLG---MVKDGKHNFY 235
             E + ++DE +   Y  D +A++ +   ++  + +  G++D  YL    +  DGK    
Sbjct: 243 VKEWIEKLDEFVKQVYLPD-VAVVGAHYPEWTKIGR--GIVD--YLSVPDLPLDGKGT-- 295

Query: 236 GDTLRFMSPDG----------KQTTDFKPSEYLDNIGEHVV--------GHNYVKYPYNK 277
               +F  P G          K  T F    +   + E V         G N   +PY  
Sbjct: 296 ----QFALPGGYIQNADLGTFKPITQFGDKYFEAGVSEAVKHAWYSYKDGDNATLHPYKG 351

Query: 278 KV--GYPD----GLY-------------RVGPLA-MLNVCDSMPTP------LAEEARKD 311
           +    Y D    G Y             +VGPL+ ML +  +   P      LA +    
Sbjct: 352 ETTPNYTDFQDEGKYSWLKSPTFYGKPAQVGPLSRMLAMLAAGHEPTKKYATLALDTVSS 411

Query: 312 FADT-FGKPANQSLAYNHARLIELLASCERVKELLED-----SEITSTDIKAEVEPKAGN 365
            A T  G  A  S    HA     + +C +V EL        + +   D+K   +P    
Sbjct: 412 LAKTKIGLDAMHSTIGRHAS--RAVVACVQVDELAHQWDLLLANMGKGDLKTYNKPTFPK 469

Query: 366 ----GVGAIYAPRGTLFHNYETDDKGIVVKANMIVASTHNV-PTMEKAIQQAAE 414
               GVG   APRG L H    DD G +     +V +T N  P  EK +  A E
Sbjct: 470 GEIAGVGFHEAPRGVLSHWVVIDD-GKIKNYQCVVPTTWNAGPRNEKGVSGAYE 522