Pairwise Alignments

Query, 418 a.a., Ni/Fe hydrogenase subunit alpha from Methanococcus maripaludis S2

Subject, 358 a.a., Ech hydrogenase, subunit EchE, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 46.6 bits (109), Expect = 1e-09
 Identities = 45/180 (25%), Positives = 74/180 (41%), Gaps = 22/180 (12%)

Query: 39  RGFEQFVVGRPAEEVPRIVPRICGICQTPHHLASVKAVDAAWGAEVPSAAEKLRELMHLG 98
           RG E     R   ++  +V R+CGIC   H +   ++++     EVP  A+ LR +    
Sbjct: 42  RGLETLASIRDYNQMVYVVERVCGICSCIHAMCYCQSLECMMNVEVPRRAKVLRTIWSEL 101

Query: 99  NMMHSHALHFYYLAAPDFVLGPDSDPAARNIIGVIGAAPEVAKKAIAMRRVGQSIVETIG 158
           + +HSH L +  L A  F                      +  +   +R     I E   
Sbjct: 102 HRIHSHLL-WLGLFADGF------------------GFESLFMQFWKVRERVMDINEATA 142

Query: 159 GRAIHPVTGVPGGVSKALSEEKRDELLNEIDEMIAYGQDGIALIKSLNEKYMDLAKTLGV 218
           G  +   T + GGV + LS E +  +L   DEM    ++  AL+ ++ + Y    +T GV
Sbjct: 143 GNRVVISTNIVGGVRRDLSPEHQKWIL---DEMNHLEREIRALMTTILDDYTVCKRTKGV 199