Pairwise Alignments

Query, 418 a.a., Ni/Fe hydrogenase subunit alpha from Methanococcus maripaludis S2

Subject, 567 a.a., nickel-dependent hydrogenase, large subunit (RefSeq) from Shewanella sp. ANA-3

 Score = 85.1 bits (209), Expect = 5e-21
 Identities = 42/115 (36%), Positives = 64/115 (55%)

Query: 3   KVTIEPLSRLEGHGKVSITLDDAGKPTDVKLHITALRGFEQFVVGRPAEEVPRIVPRICG 62
           +V I+P++R+EGH ++ + +D+           T  RG E  + GR   +V  IV RICG
Sbjct: 4   RVVIDPITRIEGHLRIEVEVDENNVINKAWSSSTLWRGIEVILKGRTPMDVGLIVQRICG 63

Query: 63  ICQTPHHLASVKAVDAAWGAEVPSAAEKLRELMHLGNMMHSHALHFYYLAAPDFV 117
           +C   H+    +AV+ A G ++P  A+ LR LM     MH H +HFY+L   D+V
Sbjct: 64  VCTYSHYRCGTEAVENALGIQIPLNAKYLRSLMQTSLYMHDHIVHFYHLHGLDWV 118