Pairwise Alignments
Query, 395 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2
Subject, 553 a.a., (Fe-S)-binding protein from Vibrio cholerae E7946 ATCC 55056
Score = 59.7 bits (143), Expect = 2e-13
Identities = 79/333 (23%), Positives = 121/333 (36%), Gaps = 43/333 (12%)
Query: 84 FPYSKGHCVLCEKCVEICPAEIISLPGKAEKPKKEIIIPQEPIAVTKDCVACGVCVPECP 143
FP +G+ L + EI +L G +KPK + P ++ C CV CP
Sbjct: 140 FPVGRGYPKLADAL-----EEIPTLMGTFDKPKYFRLDPDLCAHSSRGVKGCERCVDACP 194
Query: 144 VDAISIEDI------AVIDTDKCIYCTVCSQTCPWNAIFVAGKLPQKRQKTIKSFTVNEE 197
A+S E I+ C C+ CP AI A P QK I+ N
Sbjct: 195 AGALSSEGSEQTGHRIQINPYLCQGVGTCATACPTEAIHYALPNPTDTQKFIERLLANYH 254
Query: 198 ECIGCEKCVEACPGSMIEYNGEKLGVKLP--------EACPACGLCVESCPVEVISLEVE 249
+ G + V C YN L V LP E P+ G+ + + +V
Sbjct: 255 QAGGEKPIVLICSSRHESYNVMALKV-LPDNVIPVVVEELPSVGIDSWFAALVNGATQVL 313
Query: 250 YASAK--PVTDEGLVWSEEKCAYCGPCAIKCPTGAIKVV--------------NPKGLEL 293
+A+++ P T + ++ E A + P I ++ P GL+L
Sbjct: 314 FAASRHMPPTIQRILNQEMSMAQSLLTHLGLPKETIDILYLESLREGMPVLCEQPLGLKL 373
Query: 294 PSKKKTEKANEFAMCIRCGACAMKCPTGALKMGKMVHEGKEYARVEFSPALCNECGECVD 353
++ F A+ A + + Y +E + C C CV
Sbjct: 374 GDLIGNKRERLFT-----ALDALAETLNAQPSVQPLSISAPYGTIECQTSDCTLCMSCVA 428
Query: 354 VCPQKTLELTGDDKMP--LKGYCVMCLKCIEAC 384
VCP + L L GD ++ CV C C++AC
Sbjct: 429 VCPTRALHLAGDSPALRFIEQDCVQCGLCVKAC 461
Score = 47.8 bits (112), Expect = 8e-10
Identities = 32/116 (27%), Positives = 47/116 (40%), Gaps = 2/116 (1%)
Query: 198 ECIGCEKCVEACPGSMIEYNGEKLGVKLPEA-CPACGLCVESCPVEVISLEVEYASAKPV 256
+C C CV CP + G+ ++ E C CGLCV++CP +V+S + K
Sbjct: 419 DCTLCMSCVAVCPTRALHLAGDSPALRFIEQDCVQCGLCVKACPEQVLSATPQLNWNKAA 478
Query: 257 TDEGLVWSEEKCAYCGPCAIK-CPTGAIKVVNPKGLELPSKKKTEKANEFAMCIRC 311
+ +E+ A C C P I ++ K E N AMC C
Sbjct: 479 RQGVVTLHQEEPAKCLRCHKPFAPQSMITMLQTKLRGHSHFATPEALNRIAMCEDC 534
Score = 45.4 bits (106), Expect = 4e-09
Identities = 35/122 (28%), Positives = 51/122 (41%), Gaps = 11/122 (9%)
Query: 129 TKDCVACGVCVPECPVDAISIED----IAVIDTDKCIYCTVCSQTCPWNAIFVAGKLPQK 184
T DC C CV CP A+ + + I+ D C+ C +C + CP + +L
Sbjct: 417 TSDCTLCMSCVAVCPTRALHLAGDSPALRFIEQD-CVQCGLCVKACPEQVLSATPQLNWN 475
Query: 185 RQKTIKSFTVNEEECIGCEKCVEA-CPGSMIEYNGEKL----GVKLPEACPACGLCVESC 239
+ T+++EE C +C + P SMI KL PEA +C E C
Sbjct: 476 KAARQGVVTLHQEEPAKCLRCHKPFAPQSMITMLQTKLRGHSHFATPEALNRIAMC-EDC 534
Query: 240 PV 241
V
Sbjct: 535 RV 536
Score = 44.3 bits (103), Expect = 9e-09
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 10/58 (17%)
Query: 91 CVLCEKCVEICPAEIISLPGKAEKPKKEIIIPQEPIAVTKDCVACGVCVPECPVDAIS 148
C LC CV +CP + L G + P I +DCV CG+CV CP +S
Sbjct: 420 CTLCMSCVAVCPTRALHLAG--DSPALRFI--------EQDCVQCGLCVKACPEQVLS 467
Score = 34.7 bits (78), Expect = 7e-06
Identities = 29/117 (24%), Positives = 41/117 (35%), Gaps = 20/117 (17%)
Query: 34 CIQCFSCATACPTGA--LVEKDGKLVFNGSKCDLDGACQKACPVGIKKVDDRFPYSK--- 88
C C SC CPT A L L F C G C KACP + + ++K
Sbjct: 420 CTLCMSCVAVCPTRALHLAGDSPALRFIEQDCVQCGLCVKACPEQVLSATPQLNWNKAAR 479
Query: 89 -----------GHCVLCEKCVEICPAEIISLPGKAEKPKKEIIIPQ--EPIAVTKDC 132
C+ C K P +I++ + P+ IA+ +DC
Sbjct: 480 QGVVTLHQEEPAKCLRCHK--PFAPQSMITMLQTKLRGHSHFATPEALNRIAMCEDC 534
Score = 30.8 bits (68), Expect = 1e-04
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 13/48 (27%)
Query: 14 CNACAKACPTEA------------IEIAPFKTCIQCFSCATACPTGAL 49
C C ACP A I+I P+ C +CATACPT A+
Sbjct: 186 CERCVDACPAGALSSEGSEQTGHRIQINPY-LCQGVGTCATACPTEAI 232
Score = 28.5 bits (62), Expect = 5e-04
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 8 EDACLVCNACAKACPTEAIEIAP 30
E C+ C C KACP + + P
Sbjct: 448 EQDCVQCGLCVKACPEQVLSATP 470
Score = 27.3 bits (59), Expect = 0.001
Identities = 13/26 (50%), Positives = 13/26 (50%)
Query: 4 ISIQEDACLVCNACAKACPTEAIEIA 29
I I C CA ACPTEAI A
Sbjct: 210 IQINPYLCQGVGTCATACPTEAIHYA 235