Pairwise Alignments
Query, 395 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2
Subject, 166 a.a., NapF ferredoxin component of periplasmic nitrate reductase from Sinorhizobium meliloti 1021
Score = 63.2 bits (152), Expect = 5e-15
Identities = 44/159 (27%), Positives = 65/159 (40%), Gaps = 20/159 (12%)
Query: 108 LPGKAEKPKKEIIIPQEPIAVTKDCVACGVCVPECPVDAIS-IEDIAVID--TDKCIYCT 164
L G+ ++ + P + C CG C CP I I+D +D +C +C
Sbjct: 13 LRGRHKRGSGRVSPPGATAEGLEACTGCGRCADACPTHIIRVIDDRPALDFFIAECTFCG 72
Query: 165 VCSQTCPWNAIFVAGKLPQKRQKTIKSFTVNEEECIG-----CEKCVEACPGSMIEYNGE 219
C++ CP +F R + + E C+ C+ C +ACP I +
Sbjct: 73 QCAELCP-EPVFTG------RSQQFPHVAMIGESCLARNRTDCQACRDACPTEAIRFRPR 125
Query: 220 KLGVKLPEA----CPACGLCVESCPVEVISL-EVEYASA 253
G LPE C CG C+ CPV I + EVE+ A
Sbjct: 126 AGGPFLPELNEELCTGCGACLSVCPVAAIGIREVEWERA 164
Score = 58.2 bits (139), Expect = 2e-13
Identities = 37/130 (28%), Positives = 54/130 (41%), Gaps = 14/130 (10%)
Query: 227 EACPACGLCVESCPVEVISLEVEYASAKPVTDEGLVWSEEKCAYCGPCAIKCPTGAIKVV 286
EAC CG C ++CP +I + +P D + +C +CG CA CP V
Sbjct: 35 EACTGCGRCADACPTHIIRV----IDDRPALDFFIA----ECTFCGQCAELCPE---PVF 83
Query: 287 NPKGLELPSKKKTEKANEFAMCIRCGACAMKCPTGALKMGKMVHEGKEYARVEFSPALCN 346
+ + P ++ C AC CPT A++ G + E + LC
Sbjct: 84 TGRSQQFPHVAMIGESCLARNRTDCQACRDACPTEAIRF--RPRAGGPFL-PELNEELCT 140
Query: 347 ECGECVDVCP 356
CG C+ VCP
Sbjct: 141 GCGACLSVCP 150
Score = 54.7 bits (130), Expect = 2e-12
Identities = 40/131 (30%), Positives = 57/131 (43%), Gaps = 15/131 (11%)
Query: 197 EECIGCEKCVEACPGSMIEYNGEKLGVKLPEA-CPACGLCVESCPVEVIS-LEVEYASAK 254
E C GC +C +ACP +I ++ + A C CG C E CP V + ++
Sbjct: 35 EACTGCGRCADACPTHIIRVIDDRPALDFFIAECTFCGQCAELCPEPVFTGRSQQFPHVA 94
Query: 255 PVTDEGLVWSEEKCAYCGPCAIKCPTGAIKVVNPK--GLELPSKKKTEKANEFAMCIRCG 312
+ + L + C C CPT AI+ P+ G LP + NE +C CG
Sbjct: 95 MIGESCLARNRTDCQACRDA---CPTEAIR-FRPRAGGPFLP------ELNE-ELCTGCG 143
Query: 313 ACAMKCPTGAL 323
AC CP A+
Sbjct: 144 ACLSVCPVAAI 154
Score = 53.5 bits (127), Expect = 4e-12
Identities = 39/132 (29%), Positives = 57/132 (43%), Gaps = 18/132 (13%)
Query: 32 KTCIQCFSCATACPTGALVEKDGK--LVFNGSKCDLDGACQKACPVGI-KKVDDRFPYSK 88
+ C C CA ACPT + D + L F ++C G C + CP + +FP+
Sbjct: 35 EACTGCGRCADACPTHIIRVIDDRPALDFFIAECTFCGQCAELCPEPVFTGRSQQFPHVA 94
Query: 89 --GHCVL------CEKCVEICPAEIISLPGKAEKPKKEIIIPQEPIAVTKDCVACGVCVP 140
G L C+ C + CP E I +A P +P+ + C CG C+
Sbjct: 95 MIGESCLARNRTDCQACRDACPTEAIRFRPRAGGP----FLPELNEEL---CTGCGACLS 147
Query: 141 ECPVDAISIEDI 152
CPV AI I ++
Sbjct: 148 VCPVAAIGIREV 159
Score = 47.8 bits (112), Expect = 2e-10
Identities = 36/139 (25%), Positives = 53/139 (38%), Gaps = 36/139 (25%)
Query: 91 CVLCEKCVEICPAEIISLPGKAEKPKKEIIIPQEPIAVTKDCVACGVCVPECPVDAIS-- 148
C C +C + CP II + ++P + I + C CG C CP +
Sbjct: 37 CTGCGRCADACPTHIIRVID--DRPALDFFIAE--------CTFCGQCAELCPEPVFTGR 86
Query: 149 ---IEDIAVIDTDKCIY-----CTVCSQTCPWNAIFVAGK-----LPQKRQKTIKSFTVN 195
+A+I + C+ C C CP AI + LP+ +N
Sbjct: 87 SQQFPHVAMIG-ESCLARNRTDCQACRDACPTEAIRFRPRAGGPFLPE----------LN 135
Query: 196 EEECIGCEKCVEACPGSMI 214
EE C GC C+ CP + I
Sbjct: 136 EELCTGCGACLSVCPVAAI 154
Score = 45.4 bits (106), Expect = 1e-09
Identities = 38/140 (27%), Positives = 52/140 (37%), Gaps = 32/140 (22%)
Query: 257 TDEGLVWSEEKCAYCGPCAIKCPTGAIKVVNPKGLELPSKKKTEKANEF--AMCIRCGAC 314
T EGL E C CG CA CPT I+V++ + A +F A C CG C
Sbjct: 30 TAEGL----EACTGCGRCADACPTHIIRVIDDR-----------PALDFFIAECTFCGQC 74
Query: 315 AMKCPTGALKMGKMVHEGKEYARVEFSPALC-----NECGECVDVCPQKTLEL---TGDD 366
A CP +++ V C +C C D CP + + G
Sbjct: 75 AELCPEPV-----FTGRSQQFPHVAMIGESCLARNRTDCQACRDACPTEAIRFRPRAGGP 129
Query: 367 KMP--LKGYCVMCLKCIEAC 384
+P + C C C+ C
Sbjct: 130 FLPELNEELCTGCGACLSVC 149
Score = 27.3 bits (59), Expect = 3e-04
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 6 IQEDACLVCNACAKACPTEAIEI 28
+ E+ C C AC CP AI I
Sbjct: 134 LNEELCTGCGACLSVCPVAAIGI 156