Pairwise Alignments
Query, 395 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2
Subject, 165 a.a., ferredoxin-type protein NapF (RefSeq) from Shewanella amazonensis SB2B
Score = 58.5 bits (140), Expect = 1e-13
Identities = 35/128 (27%), Positives = 54/128 (42%), Gaps = 22/128 (17%)
Query: 34 CIQCFSCATACPTGALVEKDG---KLVFNGSKCDLDGACQKACPVGIKKVDDRFPYS--- 87
C +C C T C T +V+ + ++ F+ ++C G C K CP I +D P++
Sbjct: 36 CSRCGDCITVCETKIIVKGEAGFPEVRFDNAECTFCGECAKVCPEPIFSLDKSPPWTLEA 95
Query: 88 --KGHC-----VLCEKCVEICPAEIISL-PGKAEKPKKEIIIPQEPIAVTKDCVACGVCV 139
+ C + C+ C + C I P P E+++ C CG CV
Sbjct: 96 SIQESCLAHRGIWCQSCKDACDVSAIRFTPTLGRAPTPELLLDA--------CTGCGACV 147
Query: 140 PECPVDAI 147
CP DAI
Sbjct: 148 APCPADAI 155
Score = 55.5 bits (132), Expect = 1e-12
Identities = 35/130 (26%), Positives = 50/130 (38%), Gaps = 9/130 (6%)
Query: 123 QEPIAVTKDCVACGVCVPECPVDAISIEDIAV----IDTDKCIYCTVCSQTCPWNAIFVA 178
++ + T C CG C+ C I + D +C +C C++ CP IF
Sbjct: 27 RDDVEFTDLCSRCGDCITVCETKIIVKGEAGFPEVRFDNAECTFCGECAKVCP-EPIFSL 85
Query: 179 GKLPQKRQKTIKSFTVNEEECIGCEKCVEACPGSMIEYNGEKLGVKLPE----ACPACGL 234
K P + + I C+ C +AC S I + PE AC CG
Sbjct: 86 DKSPPWTLEASIQESCLAHRGIWCQSCKDACDVSAIRFTPTLGRAPTPELLLDACTGCGA 145
Query: 235 CVESCPVEVI 244
CV CP + I
Sbjct: 146 CVAPCPADAI 155
Score = 47.4 bits (111), Expect = 3e-10
Identities = 36/141 (25%), Positives = 51/141 (36%), Gaps = 20/141 (14%)
Query: 157 TDKCIYCTVCSQTCPWNAIFVAGKLPQKRQKTIKSFTVNEEECIGCEKCVEACPGSMIEY 216
TD C C C C I K + + EC C +C + CP +
Sbjct: 33 TDLCSRCGDCITVCETKIIV-------KGEAGFPEVRFDNAECTFCGECAKVCPEPIFSL 85
Query: 217 NGEK---LGVKLPEACPA-----CGLCVESCPVEVISLEVEYASAKPVTDEGLVWSEEKC 268
+ L + E+C A C C ++C V I A T E L+ + C
Sbjct: 86 DKSPPWTLEASIQESCLAHRGIWCQSCKDACDVSAIRFTPTLGRAP--TPELLL---DAC 140
Query: 269 AYCGPCAIKCPTGAIKVVNPK 289
CG C CP AI ++ P+
Sbjct: 141 TGCGACVAPCPADAIVMIKPQ 161
Score = 45.8 bits (107), Expect = 8e-10
Identities = 40/140 (28%), Positives = 53/140 (37%), Gaps = 27/140 (19%)
Query: 199 CIGCEKCVEACPGSMIEYNGEKLGVKLPEA------CPACGLCVESCPVEVISLEVEYAS 252
C C C+ C +I GE PE C CG C + CP + SL+
Sbjct: 36 CSRCGDCITVCETKII-VKGE---AGFPEVRFDNAECTFCGECAKVCPEPIFSLD----K 87
Query: 253 AKPVTDEGLVWSEEKCA-----YCGPCAIKCPTGAIKVVNPKGLELPSKKKTEKANEFAM 307
+ P T E + +E C +C C C AI+ G P+ + A
Sbjct: 88 SPPWTLEASI--QESCLAHRGIWCQSCKDACDVSAIRFTPTLG-RAPTPELLLDA----- 139
Query: 308 CIRCGACAMKCPTGALKMGK 327
C CGAC CP A+ M K
Sbjct: 140 CTGCGACVAPCPADAIVMIK 159
Score = 45.4 bits (106), Expect = 1e-09
Identities = 28/91 (30%), Positives = 38/91 (41%), Gaps = 20/91 (21%)
Query: 307 MCIRCGACAMKCPTGALKMGKMVHEGKEYARVEFSPALCNECGECVDVCPQKTLELTGDD 366
+C RCG C C T + G+ + V F A C CGEC VCP+ L D
Sbjct: 35 LCSRCGDCITVCETKIIVKGEA-----GFPEVRFDNAECTFCGECAKVCPEPIFSL---D 86
Query: 367 KMP-------LKGYC-----VMCLKCIEACN 385
K P ++ C + C C +AC+
Sbjct: 87 KSPPWTLEASIQESCLAHRGIWCQSCKDACD 117
Score = 39.3 bits (90), Expect = 8e-08
Identities = 33/152 (21%), Positives = 53/152 (34%), Gaps = 22/152 (14%)
Query: 223 VKLPEACPACGLCVESCPVEVISLEVEYASAKPVTDEGLVWSEEKCAYCGPCAIKCPTGA 282
V+ + C CG C+ C ++I V+ + P + +C +CG CA CP
Sbjct: 30 VEFTDLCSRCGDCITVCETKII---VKGEAGFPEVR----FDNAECTFCGECAKVCPEPI 82
Query: 283 IKVVNPKGLELPSKKKTEKANEFAMCIR-----CGACAMKCPTGALKMGKMVHEGKEYAR 337
+ S T +A+ C+ C +C C A++ +
Sbjct: 83 FSLDK-------SPPWTLEASIQESCLAHRGIWCQSCKDACDVSAIRFTPTLGRAPT--- 132
Query: 338 VEFSPALCNECGECVDVCPQKTLELTGDDKMP 369
E C CG CV CP + + P
Sbjct: 133 PELLLDACTGCGACVAPCPADAIVMIKPQTTP 164
Score = 28.1 bits (61), Expect = 2e-04
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 9 DACLVCNACAKACPTEAI 26
DAC C AC CP +AI
Sbjct: 138 DACTGCGACVAPCPADAI 155