Pairwise Alignments
Query, 395 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2
Subject, 166 a.a., ferredoxin-type protein NapF from Dechlorosoma suillum PS
Score = 65.5 bits (158), Expect = 1e-15
Identities = 43/144 (29%), Positives = 60/144 (41%), Gaps = 23/144 (15%)
Query: 22 PTEAIEIAPF-KTCIQCFSCATACPTGALVE----KDGKLVFNGSKCDLDGACQKAC-PV 75
P A++ A F + C C C CPTG L + + F +C G C AC P
Sbjct: 26 PPWAVDEAAFLQQCTGCGDCIRVCPTGILTALAPGQPPVVDFRQGECTFCGQCASACRPR 85
Query: 76 GIKKVDDRFPY----SKGHCVL------CEKCVEICPAEIISLPGKAEKPKKEIIIPQEP 125
+++ DDR P+ + G L C C + CP + P +A P P
Sbjct: 86 ALRREDDRQPWPYKATAGEACLARQQVECRSCGDFCPEGALRFPARAGGPAL-------P 138
Query: 126 IAVTKDCVACGVCVPECPVDAISI 149
+ + C CG C+ CP AISI
Sbjct: 139 VLLEDRCTGCGACLAPCPTAAISI 162
Score = 51.2 bits (121), Expect = 2e-11
Identities = 36/147 (24%), Positives = 56/147 (38%), Gaps = 24/147 (16%)
Query: 227 EACPACGLCVESCPVEVISLEVEYASAKPVTDEGLVWSEEKCAYCGPCAIKCPTGAIKVV 286
+ C CG C+ CP +++ PV D + + +C +CG CA C A++
Sbjct: 37 QQCTGCGDCIRVCPTGILTALAP--GQPPVVD----FRQGECTFCGQCASACRPRALRRE 90
Query: 287 NPKGLELPSKKKTEKANEFAMCIRCGACAMKCPTGALKMGKMVHEGKEYARVEFSPAL-- 344
+ + P K +A + C +C CP GAL+ PAL
Sbjct: 91 DDRQ-PWPYKATAGEACLARQQVECRSCGDFCPEGALRFPARAG----------GPALPV 139
Query: 345 -----CNECGECVDVCPQKTLELTGDD 366
C CG C+ CP + + D
Sbjct: 140 LLEDRCTGCGACLAPCPTAAISIGRPD 166
Score = 51.2 bits (121), Expect = 2e-11
Identities = 34/135 (25%), Positives = 51/135 (37%), Gaps = 11/135 (8%)
Query: 197 EECIGCEKCVEACPGSMIEY--NGEKLGVKLPEA-CPACGLCVESCPVEVISLEVEYASA 253
++C GC C+ CP ++ G+ V + C CG C +C + E +
Sbjct: 37 QQCTGCGDCIRVCPTGILTALAPGQPPVVDFRQGECTFCGQCASACRPRALRREDDRQPW 96
Query: 254 KPVTDEGLVWSEEKCAYCGPCAIKCPTGAIKV-VNPKGLELPSKKKTEKANEFAMCIRCG 312
G + C C CP GA++ G LP + C CG
Sbjct: 97 PYKATAGEACLARQQVECRSCGDFCPEGALRFPARAGGPALPVLLEDR-------CTGCG 149
Query: 313 ACAMKCPTGALKMGK 327
AC CPT A+ +G+
Sbjct: 150 ACLAPCPTAAISIGR 164
Score = 47.0 bits (110), Expect = 4e-10
Identities = 39/179 (21%), Positives = 57/179 (31%), Gaps = 64/179 (35%)
Query: 127 AVTKDCVACGVCVPECP---VDAISIEDIAVID--TDKCIYCTVCSQTC----------- 170
A + C CG C+ CP + A++ V+D +C +C C+ C
Sbjct: 34 AFLQQCTGCGDCIRVCPTGILTALAPGQPPVVDFRQGECTFCGQCASACRPRALRREDDR 93
Query: 171 -PWNAIFVAGKLPQKRQKTIKSFTVNEEECIGCEKCVEACPGSMIEYNGEKLGVKLPEAC 229
PW AG+ RQ+ + C C + CP + + G LP
Sbjct: 94 QPWPYKATAGEACLARQQ------------VECRSCGDFCPEGALRFPARAGGPALP--- 138
Query: 230 PACGLCVESCPVEVISLEVEYASAKPVTDEGLVWSEEKCAYCGPCAIKCPTGAIKVVNP 288
V E++C CG C CPT AI + P
Sbjct: 139 --------------------------------VLLEDRCTGCGACLAPCPTAAISIGRP 165
Score = 37.4 bits (85), Expect = 3e-07
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Query: 300 EKANEFAMCIRCGACAMKCPTGALKMGKMVHEGKEYARVEFSPALCNECGECVDVCPQKT 359
++A C CG C CPTG L + G+ V+F C CG+C C +
Sbjct: 31 DEAAFLQQCTGCGDCIRVCPTGIL---TALAPGQPPV-VDFRQGECTFCGQCASACRPRA 86
Query: 360 LELTGDDKMP 369
L DD+ P
Sbjct: 87 LR-REDDRQP 95
Score = 36.2 bits (82), Expect = 7e-07
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 4/44 (9%)
Query: 345 CNECGECVDVCPQKTLELTGDDKMPL----KGYCVMCLKCIEAC 384
C CG+C+ VCP L + P+ +G C C +C AC
Sbjct: 39 CTGCGDCIRVCPTGILTALAPGQPPVVDFRQGECTFCGQCASAC 82
Score = 34.7 bits (78), Expect = 2e-06
Identities = 25/92 (27%), Positives = 34/92 (36%), Gaps = 21/92 (22%)
Query: 4 ISIQEDACLVCNACAKACPTEAI------EIAPFKTC----------IQCFSCATACPTG 47
+ ++ C C CA AC A+ + P+K ++C SC CP G
Sbjct: 65 VDFRQGECTFCGQCASACRPRALRREDDRQPWPYKATAGEACLARQQVECRSCGDFCPEG 124
Query: 48 AL---VEKDGKL--VFNGSKCDLDGACQKACP 74
AL G V +C GAC CP
Sbjct: 125 ALRFPARAGGPALPVLLEDRCTGCGACLAPCP 156
Score = 30.0 bits (66), Expect = 5e-05
Identities = 12/21 (57%), Positives = 12/21 (57%)
Query: 8 EDACLVCNACAKACPTEAIEI 28
ED C C AC CPT AI I
Sbjct: 142 EDRCTGCGACLAPCPTAAISI 162