Pairwise Alignments
Query, 395 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2
Subject, 393 a.a., 4Fe-4S binding protein from Methanococcus maripaludis JJ
Score = 124 bits (310), Expect = 6e-33
Identities = 90/296 (30%), Positives = 139/296 (46%), Gaps = 72/296 (24%)
Query: 9 DACLVCNACAKACPTEAIEIA---PFK---------TCIQCFSCATACPTGAL----VEK 52
+ C+ C+AC ++CP++AI + FK +CI C +C +CPT L + K
Sbjct: 47 EKCISCSACKESCPSDAISMEFNEEFKKEMPVFDAGSCINCGNCVESCPTNVLEMGTLRK 106
Query: 53 DGK-LVFNGSK----------CDLDGACQKACPV--------GIKKVDDRFPYSKGHCVL 93
+ K L++N K C G C+ ACPV G+ ++D CV
Sbjct: 107 EAKELLWNVPKIINLLIDEEICVSCGTCENACPVDAISHNNTGLYEIDVNI------CVS 160
Query: 94 CEKCVEICPAE--IISL--PGKAEK------------------PKKEIIIPQEPIAVTKD 131
C+ C+++CP E I++ PG +EK ++ +I + P V
Sbjct: 161 CKNCLKVCPVENAIVTYDEPGLSEKIEIAQNTKFDRERLGSDFKEESDVIAEIPRIVPSL 220
Query: 132 CVACGVCVPECPVDAISIEDIAVIDTDKCIYCTVCSQTCPWNAIFVAGKLPQK-RQKTIK 190
C+ CG CV CP +I +E + V CI C + CP AI + +P+K ++T +
Sbjct: 221 CIGCGNCVDVCP-GSIDLERLKVTS---CIKSGKCLEVCPTTAIRIG--VPEKITKRTAE 274
Query: 191 SFTVNEEECIGCEKCVEAC--PGSMIEYNGEKLGVKLPEACPACGLCVESCPVEVI 244
+ V+EE+CIGC C AC P +++ L PE C CGLC +CPV+ I
Sbjct: 275 CYIVDEEKCIGCRICYRACNVPEAILISKETNLPYINPEYCVRCGLCQNACPVDAI 330
Score = 100 bits (248), Expect = 9e-26
Identities = 85/337 (25%), Positives = 134/337 (39%), Gaps = 63/337 (18%)
Query: 34 CIQCFSCATACPTGALVEKDGKLVFNGSKCDLDGACQKACPVGIKKVDDRFPYSKGHCVL 93
CI C +C +CP+ A+ + + +K PV + G C+
Sbjct: 49 CISCSACKESCPSDAI------------SMEFNEEFKKEMPV----------FDAGSCIN 86
Query: 94 CEKCVEICPAEIISLPGKAEKPKKEII--IPQ--EPIAVTKDCVACGVCVPECPVDAISI 149
C CVE CP ++ + G K KE++ +P+ + + CV+CG C CPVDAIS
Sbjct: 87 CGNCVESCPTNVLEM-GTLRKEAKELLWNVPKIINLLIDEEICVSCGTCENACPVDAISH 145
Query: 150 EDIAV--IDTDKCIYCTVCSQTCPWNAIFVAGKLPQKRQKT-IKSFTVNEEECIGCEKCV 206
+ + ID + C+ C C + CP V P +K I T + E +G +
Sbjct: 146 NNTGLYEIDVNICVSCKNCLKVCPVENAIVTYDEPGLSEKIEIAQNTKFDRERLGSDFKE 205
Query: 207 EACPGSMIEYNGEKLGVKLPEACPACGLCVESCPVEVISLEVEYASAKPVTDEGLVWSEE 266
E+ + I +P C CG CV+ CP + ++ S
Sbjct: 206 ESDVIAEIPRI-------VPSLCIGCGNCVDVCPGSIDLERLKVTS-------------- 244
Query: 267 KCAYCGPCAIKCPTGAIKVVNPKGLELPSKKKTEKAN--EFAMCIRCGACAMKCPTGALK 324
C G C CPT AI++ P+ + K+T + + CI C C C
Sbjct: 245 -CIKSGKCLEVCPTTAIRIGVPEKIT----KRTAECYIVDEEKCIGCRICYRAC-----N 294
Query: 325 MGKMVHEGKEYARVEFSPALCNECGECVDVCPQKTLE 361
+ + + KE +P C CG C + CP ++
Sbjct: 295 VPEAILISKETNLPYINPEYCVRCGLCQNACPVDAID 331
Score = 97.1 bits (240), Expect = 8e-25
Identities = 86/319 (26%), Positives = 125/319 (39%), Gaps = 65/319 (20%)
Query: 114 KPKKEIIIPQE-----PIA--VTKDCVACGVCVPECPVDAISIE-------DIAVIDTDK 159
K +KE IP E P+ + + C++C C CP DAIS+E ++ V D
Sbjct: 24 KSEKESFIPPERFRKIPVIFDLPEKCISCSACKESCPSDAISMEFNEEFKKEMPVFDAGS 83
Query: 160 CIYCTVCSQTCPWNAIFVAGKLPQKRQ-----KTIKSFTVNEEECIGCEKCVEACPGSMI 214
CI C C ++CP N + + + ++ I + ++EE C+ C C ACP I
Sbjct: 84 CINCGNCVESCPTNVLEMGTLRKEAKELLWNVPKIINLLIDEEICVSCGTCENACPVDAI 143
Query: 215 EYNGEKLGVKLPEACPACGLCVESCPVE---------VISLEVEYASAKPVTDE--GLVW 263
+N L C +C C++ CPVE +S ++E A E G +
Sbjct: 144 SHNNTGLYEIDVNICVSCKNCLKVCPVENAIVTYDEPGLSEKIEIAQNTKFDRERLGSDF 203
Query: 264 SEEK-------------CAYCGPCAIKCPTGAIKVVNPKGLELPSKKKTEKANEFAMCIR 310
EE C CG C C P ++L K T CI+
Sbjct: 204 KEESDVIAEIPRIVPSLCIGCGNCVDVC---------PGSIDLERLKVTS-------CIK 247
Query: 311 CGACAMKCPTGALKMGKMVHEGKEYARVEF-SPALCNECGECVDVC--PQKTLELTGDDK 367
G C CPT A+++G K A C C C C P+ L ++ +
Sbjct: 248 SGKCLEVCPTTAIRIGVPEKITKRTAECYIVDEEKCIGCRICYRACNVPEAIL-ISKETN 306
Query: 368 MPL--KGYCVMCLKCIEAC 384
+P YCV C C AC
Sbjct: 307 LPYINPEYCVRCGLCQNAC 325
Score = 77.4 bits (189), Expect = 7e-19
Identities = 66/275 (24%), Positives = 111/275 (40%), Gaps = 74/275 (26%)
Query: 158 DKCIYCTVCSQTCPWNAIFVAGKLPQKRQKTIKSFTVNEEECIGCEKCVEACPGSMIEYN 217
+KCI C+ C ++CP +AI + K++ + + CI C CVE+CP +++E
Sbjct: 47 EKCISCSACKESCPSDAISMEFNEEFKKEMPV----FDAGSCINCGNCVESCPTNVLEMG 102
Query: 218 -----GEKLGVKLP---------EACPACGLCVESCPVEVISLEVEYASAKPVTDEGLVW 263
++L +P E C +CG C +CPV+ IS + GL
Sbjct: 103 TLRKEAKELLWNVPKIINLLIDEEICVSCGTCENACPVDAISHN----------NTGLYE 152
Query: 264 SEEK-CAYCGPCAIKCPT-GAIKVVNPKGL----ELPSKKKTEK---ANEF--------- 305
+ C C C CP AI + GL E+ K ++ ++F
Sbjct: 153 IDVNICVSCKNCLKVCPVENAIVTYDEPGLSEKIEIAQNTKFDRERLGSDFKEESDVIAE 212
Query: 306 ------AMCIRCGACAMKCPTGALKMGKMVHEGKEYARVEFSPALCNECGECVDVCPQKT 359
++CI CG C CP G++ + ++ C + G+C++VCP
Sbjct: 213 IPRIVPSLCIGCGNCVDVCP-GSIDLERL------------KVTSCIKSGKCLEVCPTTA 259
Query: 360 LELTGDDKMPLKGY---------CVMCLKCIEACN 385
+ + +K+ + C+ C C ACN
Sbjct: 260 IRIGVPEKITKRTAECYIVDEEKCIGCRICYRACN 294
Score = 53.9 bits (128), Expect = 8e-12
Identities = 51/189 (26%), Positives = 76/189 (40%), Gaps = 30/189 (15%)
Query: 6 IQEDACLVCNACAKACP-------------TEAIEIAPFKTCIQCFSCATACPTGALVEK 52
I + C+ C C K CP +E IEIA + + ++ +
Sbjct: 153 IDVNICVSCKNCLKVCPVENAIVTYDEPGLSEKIEIAQNTKFDRERLGSDFKEESDVIAE 212
Query: 53 DGKLVFNGSKCDLDGACQKACPVGIKKVDDRFPYSKGHCVLCEKCVEICP--AEIISLPG 110
++V S C G C CP I D C+ KC+E+CP A I +P
Sbjct: 213 IPRIV--PSLCIGCGNCVDVCPGSI----DLERLKVTSCIKSGKCLEVCPTTAIRIGVPE 266
Query: 111 KAEKPKKEIIIPQEPIAVTKDCVACGVCVPECPV-DAISIE---DIAVIDTDKCIYCTVC 166
K K E I E + C+ C +C C V +AI I ++ I+ + C+ C +C
Sbjct: 267 KITKRTAECYIVDE-----EKCIGCRICYRACNVPEAILISKETNLPYINPEYCVRCGLC 321
Query: 167 SQTCPWNAI 175
CP +AI
Sbjct: 322 QNACPVDAI 330