Pairwise Alignments
Query, 395 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2
Subject, 252 a.a., 4Fe-4S binding protein from Methanococcus maripaludis JJ
Score = 99.8 bits (247), Expect = 8e-26
Identities = 64/218 (29%), Positives = 101/218 (46%), Gaps = 22/218 (10%)
Query: 49 LVEKDGKLVFNGSKCDLDGACQKACPV-GIKKVDDRFPYS--KGHCVLCEKCVEICPAEI 105
+V + L +KC C + CPV IK+ + P CV CE C + CP
Sbjct: 34 MVPVERNLYVESNKCIRCELCYEVCPVDAIKEPSVKSPAEIIPEKCVKCEICAKTCPVGA 93
Query: 106 IS-LPGKAEKPKKEIIIPQEPIAVT-------------KDCVACGVCVPECPVDAISIED 151
I+ L G+A+ + ++ + I VT + C+ CG+C CP AI++E
Sbjct: 94 INVLEGRAKLEEDTVVYELKEIDVTHRKIRLVKHELDEESCIKCGICERFCPTSAITVEK 153
Query: 152 IAVIDT--DKCIYCTVCSQTCPWNAIFVAGKLPQKRQKTIKSFTVNEEECIGCEKCVEAC 209
ID D C+ CT C + CP +AI V ++ + + ++N + CI C C E C
Sbjct: 154 RNSIDINLDLCMGCTACEKVCPKSAIKVENEMGEITAEN--EISLNNDTCINCMVCSEIC 211
Query: 210 PGSMIEYNGEKLGVKLPEACPACGLCVESCPVEVISLE 247
P I Y + + + C CG C ++CPV I+++
Sbjct: 212 PVGAIVYEDGLMKLD-DKMCIFCGKCEKNCPVTAIAIK 248
Score = 97.4 bits (241), Expect = 4e-25
Identities = 68/230 (29%), Positives = 99/230 (43%), Gaps = 65/230 (28%)
Query: 91 CVLCEKCVEICPAEIISLPGKAEKPKKEIIIPQEPIAVTKDCVACGVCVPECPVDAISI- 149
C+ CE C E+CP + I P + P + IIP++ CV C +C CPV AI++
Sbjct: 48 CIRCELCYEVCPVDAIKEPS-VKSPAE--IIPEK-------CVKCEICAKTCPVGAINVL 97
Query: 150 -------EDIAV-------------------IDTDKCIYCTVCSQTCPWNAIFVAGKLPQ 183
ED V +D + CI C +C + CP +AI V +
Sbjct: 98 EGRAKLEEDTVVYELKEIDVTHRKIRLVKHELDEESCIKCGICERFCPTSAITV-----E 152
Query: 184 KRQKTIKSFTVNEEECIGCEKCVEACPGSMIEYNGEKLGVKLP-------EACPACGLCV 236
KR S +N + C+GC C + CP S I+ E + + C C +C
Sbjct: 153 KRN----SIDINLDLCMGCTACEKVCPKSAIKVENEMGEITAENEISLNNDTCINCMVCS 208
Query: 237 ESCPVEVISLEVEYASAKPVTDEGLVWSEEK-CAYCGPCAIKCPTGAIKV 285
E CPV I V ++GL+ ++K C +CG C CP AI +
Sbjct: 209 EICPVGAI-----------VYEDGLMKLDDKMCIFCGKCEKNCPVTAIAI 247
Score = 93.6 bits (231), Expect = 6e-24
Identities = 68/229 (29%), Positives = 99/229 (43%), Gaps = 36/229 (15%)
Query: 117 KEIIIPQEP--IAVTKDCVACGVCVPECPVDAI---SIEDIAVIDTDKCIYCTVCSQTCP 171
K++++P E + C+ C +C CPVDAI S++ A I +KC+ C +C++TCP
Sbjct: 31 KDLMVPVERNLYVESNKCIRCELCYEVCPVDAIKEPSVKSPAEIIPEKCVKCEICAKTCP 90
Query: 172 WNAIFV---AGKLPQ-------------KRQKTIKSFTVNEEECIGCEKCVEACPGSMIE 215
AI V KL + R+ + ++EE CI C C CP S I
Sbjct: 91 VGAINVLEGRAKLEEDTVVYELKEIDVTHRKIRLVKHELDEESCIKCGICERFCPTSAIT 150
Query: 216 Y-NGEKLGVKLPEACPACGLCVESCPVEVISLEVEYASAKPVTDEGLVWSEEKCAYCGPC 274
+ + L + C C C + CP I +E E + L + + C C C
Sbjct: 151 VEKRNSIDINL-DLCMGCTACEKVCPKSAIKVENEMGEITAENEISL--NNDTCINCMVC 207
Query: 275 AIKCPTGAIKVVNPKGLELPSKKKTEKANEFAMCIRCGACAMKCPTGAL 323
+ CP GAI V ++L K MCI CG C CP A+
Sbjct: 208 SEICPVGAI-VYEDGLMKLDDK----------MCIFCGKCEKNCPVTAI 245
Score = 89.0 bits (219), Expect = 1e-22
Identities = 63/237 (26%), Positives = 93/237 (39%), Gaps = 43/237 (18%)
Query: 176 FVAGKLPQKRQKTIKSFTVNEEECIGCEKCVEACPGSMIEYNGEKLGVKL-PEACPACGL 234
FV KL ++ V +CI CE C E CP I+ K ++ PE C C +
Sbjct: 25 FVKEKLKDLMVPVERNLYVESNKCIRCELCYEVCPVDAIKEPSVKSPAEIIPEKCVKCEI 84
Query: 235 CVESCPVEVIS-------------------LEVEYASAKPVTDEGLVWSEEKCAYCGPCA 275
C ++CPV I+ ++V + + V E EE C CG C
Sbjct: 85 CAKTCPVGAINVLEGRAKLEEDTVVYELKEIDVTHRKIRLVKHE---LDEESCIKCGICE 141
Query: 276 IKCPTGAIKVVNPKGLELPSKKKTEKANEFAMCIRCGACAMKCPTGALKMGKMVHEGKEY 335
CPT AI V +++ +C+ C AC CP A+K+ + E
Sbjct: 142 RFCPTSAITVEKRNSIDI----------NLDLCMGCTACEKVCPKSAIKVENEMGEITAE 191
Query: 336 ARVEFSPALCNECGECVDVCPQKTLE-----LTGDDKMPLKGYCVMCLKCIEACNKT 387
+ + C C C ++CP + + DDKM C+ C KC + C T
Sbjct: 192 NEISLNNDTCINCMVCSEICPVGAIVYEDGLMKLDDKM-----CIFCGKCEKNCPVT 243
Score = 88.2 bits (217), Expect = 2e-22
Identities = 60/213 (28%), Positives = 88/213 (41%), Gaps = 43/213 (20%)
Query: 6 IQEDACLVCNACAKACPTEAI---------EIAPFKTCIQCFSCATACPTGALVEKDGK- 55
++ + C+ C C + CP +AI EI P K C++C CA CP GA+ +G+
Sbjct: 43 VESNKCIRCELCYEVCPVDAIKEPSVKSPAEIIPEK-CVKCEICAKTCPVGAINVLEGRA 101
Query: 56 ------LVFNGSKCDLD-------------------GACQKACPVGIKKVDDR--FPYSK 88
+V+ + D+ G C++ CP V+ R +
Sbjct: 102 KLEEDTVVYELKEIDVTHRKIRLVKHELDEESCIKCGICERFCPTSAITVEKRNSIDINL 161
Query: 89 GHCVLCEKCVEICPAEIISLPGKAEKPKKEIIIPQEPIAVTKDCVACGVCVPECPVDAIS 148
C+ C C ++CP I K E EI E C+ C VC CPV AI
Sbjct: 162 DLCMGCTACEKVCPKSAI----KVENEMGEITAENEISLNNDTCINCMVCSEICPVGAIV 217
Query: 149 IED-IAVIDTDKCIYCTVCSQTCPWNAIFVAGK 180
ED + +D CI+C C + CP AI + K
Sbjct: 218 YEDGLMKLDDKMCIFCGKCEKNCPVTAIAIKQK 250
Score = 82.0 bits (201), Expect = 2e-20
Identities = 62/246 (25%), Positives = 101/246 (41%), Gaps = 55/246 (22%)
Query: 147 ISIEDIAVIDTDKCIYCTVCSQTCPWNAIFVAGKLPQKRQKTIKS-FTVNEEECIGCEKC 205
+ +E ++++KCI C +C + CP +AI ++ ++KS + E+C+ CE C
Sbjct: 35 VPVERNLYVESNKCIRCELCYEVCPVDAI---------KEPSVKSPAEIIPEKCVKCEIC 85
Query: 206 VEACPGSMIE--------------YNGEKLGVKL-----------PEACPACGLCVESCP 240
+ CP I Y +++ V E+C CG+C CP
Sbjct: 86 AKTCPVGAINVLEGRAKLEEDTVVYELKEIDVTHRKIRLVKHELDEESCIKCGICERFCP 145
Query: 241 VEVISLEVEYASAKPVTDEGLVWSEEKCAYCGPCAIKCPTGAIKVVNPKGLELPSKKKTE 300
I++E + D L + C C C CP AIKV N G E+ ++ +
Sbjct: 146 TSAITVEKRNS-----IDINL----DLCMGCTACEKVCPKSAIKVENEMG-EITAENEIS 195
Query: 301 KANEFAMCIRCGACAMKCPTGALKMGKMVHEGKEYARVEFSPALCNECGECVDVCPQKTL 360
N+ CI C C+ CP GA+ E ++ +C CG+C CP +
Sbjct: 196 LNND--TCINCMVCSEICPVGAIVY--------EDGLMKLDDKMCIFCGKCEKNCPVTAI 245
Query: 361 ELTGDD 366
+ D
Sbjct: 246 AIKQKD 251
Score = 63.9 bits (154), Expect = 5e-15
Identities = 31/86 (36%), Positives = 40/86 (46%), Gaps = 14/86 (16%)
Query: 4 ISIQEDACLVCNACAKACPTEAIEIAPFK--------------TCIQCFSCATACPTGAL 49
I I D C+ C AC K CP AI++ TCI C C+ CP GA+
Sbjct: 157 IDINLDLCMGCTACEKVCPKSAIKVENEMGEITAENEISLNNDTCINCMVCSEICPVGAI 216
Query: 50 VEKDGKLVFNGSKCDLDGACQKACPV 75
V +DG + + C G C+K CPV
Sbjct: 217 VYEDGLMKLDDKMCIFCGKCEKNCPV 242
Score = 26.9 bits (58), Expect = 6e-04
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 4 ISIQEDACLVCNACAKACPTEAIEI 28
+ + + C+ C C K CP AI I
Sbjct: 223 MKLDDKMCIFCGKCEKNCPVTAIAI 247