Pairwise Alignments
Query, 395 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2
Subject, 138 a.a., 4Fe-4S binding protein from Methanococcus maripaludis JJ
Score = 60.5 bits (145), Expect = 3e-14
Identities = 45/147 (30%), Positives = 62/147 (42%), Gaps = 28/147 (19%)
Query: 158 DKCIYCTVCSQTCPWNAIFVAGKLPQKRQKTIKSFTVNEEECIGCEK--CVEACPGSMIE 215
D C+ C C + CP NAI V +P + C+ CE C+ CP IE
Sbjct: 8 DLCVDCKKCERACPINAIHVFDGIPIR--------------CMHCEDAPCLNVCPEDAIE 53
Query: 216 YNGEKLGVKLPEACPACGLCVESCPVEVISLEVEYASAKPVTDEGLVWSEEKCAYCGPCA 275
+K+ V PE C C LC E CPV I +++ + V +G + + C
Sbjct: 54 KIADKVVVH-PEKCVGCALCAEVCPVGAI--QIDRCTKVAVKCDGCIERGSEV-----CL 105
Query: 276 IKCPTGAI----KVVNPKGLELPSKKK 298
CPT A+ + K EL SK K
Sbjct: 106 EVCPTKALDYYENTIENKRAELVSKLK 132
Score = 55.8 bits (133), Expect = 7e-13
Identities = 34/108 (31%), Positives = 50/108 (46%), Gaps = 12/108 (11%)
Query: 9 DACLVCNACAKACPTEAIEI---APFKTCIQCFS--CATACPTGALVEKDGKLVFNGSKC 63
D C+ C C +ACP AI + P + C+ C C CP A+ + K+V + KC
Sbjct: 8 DLCVDCKKCERACPINAIHVFDGIPIR-CMHCEDAPCLNVCPEDAIEKIADKVVVHPEKC 66
Query: 64 DLDGACQKACPVGIKKVDDRFPYSKGHCVLC-----EKCVEICPAEII 106
C + CPVG ++ DR C C E C+E+CP + +
Sbjct: 67 VGCALCAEVCPVGAIQI-DRCTKVAVKCDGCIERGSEVCLEVCPTKAL 113
Score = 55.5 bits (132), Expect = 9e-13
Identities = 39/131 (29%), Positives = 54/131 (41%), Gaps = 30/131 (22%)
Query: 91 CVLCEKCVEICPAEIISLPGKAEKPKKEIIIPQEPIAVTKDCVAC--GVCVPECPVDAIS 148
CV C+KC CP I + PI C+ C C+ CP DAI
Sbjct: 10 CVDCKKCERACPINAIH------------VFDGIPIR----CMHCEDAPCLNVCPEDAIE 53
Query: 149 -IEDIAVIDTDKCIYCTVCSQTCPWNAIFVAGKLPQKRQKTIKSFTVNEEECI--GCEKC 205
I D V+ +KC+ C +C++ CP AI + V + CI G E C
Sbjct: 54 KIADKVVVHPEKCVGCALCAEVCPVGAIQI---------DRCTKVAVKCDGCIERGSEVC 104
Query: 206 VEACPGSMIEY 216
+E CP ++Y
Sbjct: 105 LEVCPTKALDY 115
Score = 49.7 bits (117), Expect = 5e-11
Identities = 35/118 (29%), Positives = 49/118 (41%), Gaps = 18/118 (15%)
Query: 34 CIQCFSCATACPTGALVEKDGKLVFNGSKCDLDGACQKACPV-GIKKVDDRFPYSKGHCV 92
C+ C C ACP A+ DG + C+ D C CP I+K+ D+ CV
Sbjct: 10 CVDCKKCERACPINAIHVFDG-IPIRCMHCE-DAPCLNVCPEDAIEKIADKVVVHPEKCV 67
Query: 93 LCEKCVEICPAEIISLPGKAEKPKKEIIIPQEPIAVTKD-CVACG--VCVPECPVDAI 147
C C E+CP I + + +AV D C+ G VC+ CP A+
Sbjct: 68 GCALCAEVCPVGAIQIDRCTK------------VAVKCDGCIERGSEVCLEVCPTKAL 113
Score = 48.9 bits (115), Expect = 8e-11
Identities = 36/139 (25%), Positives = 55/139 (39%), Gaps = 36/139 (25%)
Query: 227 EACPACGLCVESCPVEVISLEVEYASAKPVTDEGLVWSEEKCAYC--GPCAIKCPTGAIK 284
+ C C C +CP+ I + P+ +C +C PC CP AI+
Sbjct: 8 DLCVDCKKCERACPINAIHV----FDGIPI----------RCMHCEDAPCLNVCPEDAIE 53
Query: 285 VVNPKGLELPSKKKTEKANEFAMCIRCGACAMKCPTGALKMGKMVHEGKEYARVEFSPAL 344
+ K + P K C+ C CA CP GA+++ + +V
Sbjct: 54 KIADKVVVHPEK-----------CVGCALCAEVCPVGAIQIDRC-------TKVAVKCDG 95
Query: 345 CNECGE--CVDVCPQKTLE 361
C E G C++VCP K L+
Sbjct: 96 CIERGSEVCLEVCPTKALD 114
Score = 40.8 bits (94), Expect = 2e-08
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 14/80 (17%)
Query: 307 MCIRCGACAMKCPTGALKMGKMVHEGKEYARVEFSPALCNECGE--CVDVCPQKTLELTG 364
+C+ C C CP A+ V +G P C C + C++VCP+ +E
Sbjct: 9 LCVDCKKCERACPINAIH----VFDG--------IPIRCMHCEDAPCLNVCPEDAIEKIA 56
Query: 365 DDKMPLKGYCVMCLKCIEAC 384
D + CV C C E C
Sbjct: 57 DKVVVHPEKCVGCALCAEVC 76
Score = 37.7 bits (86), Expect = 2e-07
Identities = 31/124 (25%), Positives = 47/124 (37%), Gaps = 32/124 (25%)
Query: 268 CAYCGPCAIKCPTGAIKVVNPKGLELPSKKKTEKANEFAMCIRC--GACAMKCPTGALKM 325
C C C CP AI V + G+ + C+ C C CP A++
Sbjct: 10 CVDCKKCERACPINAIHVFD--GIPI-------------RCMHCEDAPCLNVCPEDAIE- 53
Query: 326 GKMVHEGKEYARVEFSPALCNECGECVDVCPQKTLELTGDDKMPLKGYCVMCLK-----C 380
K +V P C C C +VCP +++ K+ +K C C++ C
Sbjct: 54 -------KIADKVVVHPEKCVGCALCAEVCPVGAIQIDRCTKVAVK--CDGCIERGSEVC 104
Query: 381 IEAC 384
+E C
Sbjct: 105 LEVC 108
Score = 32.0 bits (71), Expect = 1e-05
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 9/55 (16%)
Query: 4 ISIQEDACLVCNACAKACPTEAIEI-APFKTCIQCFS--------CATACPTGAL 49
+ + + C+ C CA+ CP AI+I K ++C C CPT AL
Sbjct: 59 VVVHPEKCVGCALCAEVCPVGAIQIDRCTKVAVKCDGCIERGSEVCLEVCPTKAL 113