Pairwise Alignments

Query, 395 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 397 a.a., 4Fe-4S binding protein from Methanococcus maripaludis JJ

 Score =  501 bits (1291), Expect = e-146
 Identities = 229/401 (57%), Positives = 287/401 (71%), Gaps = 14/401 (3%)

Query: 4   ISIQEDACLVCNACAKACPTEAIEIAPFKTCIQCFSCATACPTGAL----VEKDGKLV-- 57
           I I  + C +C AC  +CPTEA+++ PFK C  C +C  ACP  AL    +E +GK +  
Sbjct: 2   IKINTEDCYMCKACENSCPTEALKLNPFKVCQLCGNCVNACPNDALNLREIELNGKTIKQ 61

Query: 58  --FNGSKCDLDGACQKACPVGIKKVDDRFPYSKGHCVLCEKCVEICPAEIISLPGKAEKP 115
             +  +KCDL G C K CP  +K  +D+    KG CV C KCVE CP + + + G  E  
Sbjct: 62  IEYFPTKCDLCGECVKVCPNNLKIENDKL---KGFCVGCMKCVEACPDDYVGMEGVVEPA 118

Query: 116 KKEIIIPQEPIAVTKDCVACGVCVPECPVDAISIE-DIAVIDTDKCIYCTVCSQTCPWNA 174
           K+ I +P+EPIAVT+DCV CGVC+ ECPV A+SIE + AV+D + CIYC++C+QTCPWNA
Sbjct: 119 KRNITLPKEPIAVTEDCVGCGVCISECPVGALSIEGEKAVVDKNSCIYCSICAQTCPWNA 178

Query: 175 IFVAGKLPQKRQKTIKSFTVNEEECIGCEKCVEACPGSMIEYNGEKLGVKLPEACPACGL 234
           IFVAGK   KR K I  F+V+ + CIGC  C + CP  +I  N E + V  P+ CPACGL
Sbjct: 179 IFVAGKKSPKRDKNIVKFSVDSDLCIGCGDCTDKCPRDLIVLN-EMVAVP-PKGCPACGL 236

Query: 235 CVESCPVEVISLEVEYASAKPVTDEGLVWSEEKCAYCGPCAIKCPTGAIKVVNPKGLELP 294
           C+ +CPV+ I L VEY S KP+TDEG+VW EEKCAYCGPCAIKCP  AI VVNPKGLE+P
Sbjct: 237 CMAACPVDAIELVVEYGSPKPITDEGIVWDEEKCAYCGPCAIKCPNNAINVVNPKGLEMP 296

Query: 295 SKKKTEKANEFAMCIRCGACAMKCPTGALKMGKMVHEGKEYARVEFSPALCNECGECVDV 354
           S+KKTEKANEF MCIRCGAC   CP  AL++GK++H+GKEY R+EFSP LC+ CG+C++ 
Sbjct: 297 SRKKTEKANEFKMCIRCGACVQSCPNDALRIGKIIHDGKEYERIEFSPNLCDSCGKCIET 356

Query: 355 CPQKTLELTGDDKMPLKGYCVMCLKCIEACNKTKKEALSLK 395
           CP   L LTG  + PL+G+CVMCLKCIEAC+K KK ALSLK
Sbjct: 357 CPYDMLNLTGKPEKPLEGFCVMCLKCIEACDKAKKSALSLK 397



 Score = 71.6 bits (174), Expect = 4e-17
 Identities = 45/157 (28%), Positives = 63/157 (40%), Gaps = 49/157 (31%)

Query: 3   GISIQEDACLVCNACAKACPTEAIEIA-----------------PFKTCIQCFSCATACP 45
           GI   E+ C  C  CA  CP  AI +                   FK CI+C +C  +CP
Sbjct: 262 GIVWDEEKCAYCGPCAIKCPNNAINVVNPKGLEMPSRKKTEKANEFKMCIRCGACVQSCP 321

Query: 46  TGALVEKDGKLVFNGSKCDLDGACQKACPVGIKKVDDRFPYSKGHCVLCEKCVEICPAEI 105
             AL  + GK++ +G                  K  +R  +S   C  C KC+E CP ++
Sbjct: 322 NDAL--RIGKIIHDG------------------KEYERIEFSPNLCDSCGKCIETCPYDM 361

Query: 106 ISLPGKAEKPKKEIIIPQEPIAVTKDCVACGVCVPEC 142
           ++L GK EKP +              CV C  C+  C
Sbjct: 362 LNLTGKPEKPLEGF------------CVMCLKCIEAC 386