Pairwise Alignments
Query, 395 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2
Subject, 154 a.a., 4Fe-4S dicluster domain-containing protein from Methanococcus maripaludis JJ
Score = 59.7 bits (143), Expect = 5e-14
Identities = 41/135 (30%), Positives = 56/135 (41%), Gaps = 25/135 (18%)
Query: 11 CLVCNACAKACPTEAIEIAPFKT------CIQCFS----CATACPTGALVEKDGKLVFNG 60
C CN C +AC E KT C+QC C CP A+ E DG LV +
Sbjct: 12 CTECNDCIEACKKEHGVARAIKTHSIPMFCLQCHPDKAPCKQVCPVNAIEELDGALVVDE 71
Query: 61 SKCDLDGACQKACPVGIKKVDDRFPYSKGHCVLCEK-------CVEICPAEIISLPG--- 110
C L C ACP+G + ++ S C LC + CVE C + ++ L
Sbjct: 72 ESCILCRLCMVACPIGALTI-NKDAKSVQKCTLCMETDRMLPACVEACKSNVLKLFSVED 130
Query: 111 ----KAEKPKKEIII 121
K EK +++I
Sbjct: 131 LEELKREKSHMDVVI 145
Score = 48.1 bits (113), Expect = 2e-10
Identities = 36/143 (25%), Positives = 53/143 (37%), Gaps = 35/143 (24%)
Query: 194 VNEEECIGCEKCVEACPGSMIEYNGEKLGVK---LPEACPAC----GLCVESCPVEVISL 246
V+ +C C C+EAC + +G +K +P C C C + CPV I
Sbjct: 7 VDARKCTECNDCIEACK----KEHGVARAIKTHSIPMFCLQCHPDKAPCKQVCPVNAIE- 61
Query: 247 EVEYASAKPVTDEGLVWSEEKCAYCGPCAIKCPTGAIKVVNPKGLELPSKKKTEKANEFA 306
D LV EE C C C + CP GA+ + K + +
Sbjct: 62 ---------ELDGALVVDEESCILCRLCMVACPIGALTI----------NKDAKSVQKCT 102
Query: 307 MCIRCG----ACAMKCPTGALKM 325
+C+ AC C + LK+
Sbjct: 103 LCMETDRMLPACVEACKSNVLKL 125
Score = 47.4 bits (111), Expect = 3e-10
Identities = 36/133 (27%), Positives = 51/133 (38%), Gaps = 33/133 (24%)
Query: 130 KDCVACGVCVPECPVD-----AISIEDIAVIDTDKCIYC----TVCSQTCPWNAIFVAGK 180
+ C C C+ C + AI I + C+ C C Q CP NAI
Sbjct: 10 RKCTECNDCIEACKKEHGVARAIKTHSIPMF----CLQCHPDKAPCKQVCPVNAI----- 60
Query: 181 LPQKRQKTIKSFTVNEEECIGCEKCVEACPGSMIEYNGEKLGVKLPEACPAC-------G 233
++ + V+EE CI C C+ ACP + N + K + C C
Sbjct: 61 -----EELDGALVVDEESCILCRLCMVACPIGALTINKD---AKSVQKCTLCMETDRMLP 112
Query: 234 LCVESCPVEVISL 246
CVE+C V+ L
Sbjct: 113 ACVEACKSNVLKL 125
Score = 44.3 bits (103), Expect = 2e-09
Identities = 36/162 (22%), Positives = 65/162 (40%), Gaps = 34/162 (20%)
Query: 149 IEDIAVIDTDKCIYCTVCSQTCPWNAIFVAGKLPQKRQKTIKSFTVNEEECIGCE----K 204
++ + V+D KC C C + C K + IK+ ++ C+ C
Sbjct: 1 MKSLMVVDARKCTECNDCIEAC---------KKEHGVARAIKTHSI-PMFCLQCHPDKAP 50
Query: 205 CVEACPGSMIEYNGEKLGVKLPEACPACGLCVESCPVEVISLEVEYASAKPVTDEGLVWS 264
C + CP + IE L V E+C C LC+ +CP+ +++ + S
Sbjct: 51 CKQVCPVNAIEELDGALVVD-EESCILCRLCMVACPIGALTINKDAKSV----------- 98
Query: 265 EEKCAYC-------GPCAIKCPTGAIKVVNPKGLELPSKKKT 299
+KC C C C + +K+ + + LE ++K+
Sbjct: 99 -QKCTLCMETDRMLPACVEACKSNVLKLFSVEDLEELKREKS 139
Score = 39.7 bits (91), Expect = 6e-08
Identities = 33/138 (23%), Positives = 50/138 (36%), Gaps = 28/138 (20%)
Query: 229 CPACGLCVESCPVEVISLEVEYASAKPVTDEGLVWSEEKCAYC----GPCAIKCPTGAIK 284
C C C+E+C + E+ A+ + + C C PC CP AI+
Sbjct: 12 CTECNDCIEAC-------KKEHGVARAIKTHSIPMF---CLQCHPDKAPCKQVCPVNAIE 61
Query: 285 VVNPKGLELPSKKKTEKANEFAMCIRCGACAMKCPTGALKMGKMVHEGKEYARVEFSPAL 344
EL ++ + CI C C + CP GAL + K + K +
Sbjct: 62 -------ELDGALVVDEES----CILCRLCMVACPIGALTINK---DAKSVQKCTLCMET 107
Query: 345 CNECGECVDVCPQKTLEL 362
CV+ C L+L
Sbjct: 108 DRMLPACVEACKSNVLKL 125
Score = 30.8 bits (68), Expect = 3e-05
Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 11/55 (20%)
Query: 6 IQEDACLVCNACAKACPTEAIEI----APFKTCIQCF-------SCATACPTGAL 49
+ E++C++C C ACP A+ I + C C +C AC + L
Sbjct: 69 VDEESCILCRLCMVACPIGALTINKDAKSVQKCTLCMETDRMLPACVEACKSNVL 123
Score = 24.6 bits (52), Expect = 0.002
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 374 CVMCLKCIEACNKTKKEALSLK 395
C C CIEAC K A ++K
Sbjct: 12 CTECNDCIEACKKEHGVARAIK 33