Pairwise Alignments

Query, 395 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 192 a.a., electron transport complex subunit RsxB from Klebsiella michiganensis M5al

 Score = 52.8 bits (125), Expect = 8e-12
 Identities = 21/54 (38%), Positives = 29/54 (53%)

Query: 193 TVNEEECIGCEKCVEACPGSMIEYNGEKLGVKLPEACPACGLCVESCPVEVISL 246
           T++E  CIGC KC++ACP   I      +   + + C  C LCV  CP + I L
Sbjct: 111 TIDEANCIGCTKCIQACPVDAIIGATRAMHTVMSDLCTGCNLCVAPCPTQCIEL 164



 Score = 46.6 bits (109), Expect = 6e-10
 Identities = 26/64 (40%), Positives = 29/64 (45%), Gaps = 9/64 (14%)

Query: 152 IAVIDTDKCIYCTVCSQTCPWNAIFVAGKLPQKRQKTIKSFTVNEEECIGCEKCVEACPG 211
           +A ID   CI CT C Q CP +AI  A         T    TV  + C GC  CV  CP 
Sbjct: 109 LATIDEANCIGCTKCIQACPVDAIIGA---------TRAMHTVMSDLCTGCNLCVAPCPT 159

Query: 212 SMIE 215
             IE
Sbjct: 160 QCIE 163



 Score = 38.9 bits (89), Expect = 1e-07
 Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 16/88 (18%)

Query: 66  DGACQKACPVGIKKVDDRFPYSKGHCVLCEKCVEICPAEIISLPGKAEKPKKEIIIPQEP 125
           DG  Q+A P  +    D     + +C+ C KC++ CP + I    +A             
Sbjct: 97  DGDAQEAEPARMLATID-----EANCIGCTKCIQACPVDAIIGATRAMHT---------- 141

Query: 126 IAVTKDCVACGVCVPECPVDAISIEDIA 153
             ++  C  C +CV  CP   I +  +A
Sbjct: 142 -VMSDLCTGCNLCVAPCPTQCIELRPVA 168



 Score = 38.9 bits (89), Expect = 1e-07
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)

Query: 131 DCVACGVCVPECPVDAI--SIEDIAVIDTDKCIYCTVCSQTCPWNAI 175
           +C+ C  C+  CPVDAI  +   +  + +D C  C +C   CP   I
Sbjct: 116 NCIGCTKCIQACPVDAIIGATRAMHTVMSDLCTGCNLCVAPCPTQCI 162



 Score = 33.5 bits (75), Expect = 5e-06
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 5   SIQEDACLVCNACAKACPTEAIEIAP 30
           ++  D C  CN C   CPT+ IE+ P
Sbjct: 141 TVMSDLCTGCNLCVAPCPTQCIELRP 166



 Score = 33.1 bits (74), Expect = 7e-06
 Identities = 19/57 (33%), Positives = 22/57 (38%), Gaps = 7/57 (12%)

Query: 306 AMCIRCGACAMKCPTGALKMGKMVHEGKEYARVEFSPALCNECGECVDVCPQKTLEL 362
           A CI C  C   CP  A+        G   A       LC  C  CV  CP + +EL
Sbjct: 115 ANCIGCTKCIQACPVDAII-------GATRAMHTVMSDLCTGCNLCVAPCPTQCIEL 164



 Score = 25.4 bits (54), Expect = 0.001
 Identities = 10/32 (31%), Positives = 14/32 (43%)

Query: 19  KACPTEAIEIAPFKTCIQCFSCATACPTGALV 50
           +A P   +       CI C  C  ACP  A++
Sbjct: 102 EAEPARMLATIDEANCIGCTKCIQACPVDAII 133



 Score = 23.9 bits (50), Expect = 0.004
 Identities = 7/11 (63%), Positives = 9/11 (81%)

Query: 374 CVMCLKCIEAC 384
           C+ C KCI+AC
Sbjct: 117 CIGCTKCIQAC 127