Pairwise Alignments
Query, 395 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2
Subject, 162 a.a., iron-sulfur cluster-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710
Score = 58.5 bits (140), Expect = 1e-13
Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 13/123 (10%)
Query: 266 EKCAYCGPCAIKCPTGAIKVVN--PKGLELPSKKKTEKANEFAMCIRC--GACAMKCPTG 321
E+C C C++ C K ++ G+ + S E +C+ C CA CPTG
Sbjct: 2 ERCIGCHACSLACARLVHKRLSWVTAGIRITSAGGLSTGFEARLCLACDPAPCAQACPTG 61
Query: 322 ALKMGKMVHEGKEYARVEFSPALCNECGECVDVCPQKTLELTGDDKMPLKGYCVMCLKCI 381
A + ++ V+ +LC CG C + CP + + G+ +P C+ C +C+
Sbjct: 62 A-------YAQRKGGGVKVDRSLCIRCGRCAEACPVDAVHMDGETGLPY--VCIHCGRCV 112
Query: 382 EAC 384
C
Sbjct: 113 AFC 115
Score = 58.2 bits (139), Expect = 2e-13
Identities = 41/124 (33%), Positives = 54/124 (43%), Gaps = 27/124 (21%)
Query: 9 DACLVCNACAKACP----------TEAIEIA---------PFKTCIQC--FSCATACPTG 47
+ C+ C+AC+ AC T I I + C+ C CA ACPTG
Sbjct: 2 ERCIGCHACSLACARLVHKRLSWVTAGIRITSAGGLSTGFEARLCLACDPAPCAQACPTG 61
Query: 48 ALVE-KDGKLVFNGSKCDLDGACQKACPVGIKKVDDR--FPYSKGHCVLCEKCVEICPAE 104
A + K G + + S C G C +ACPV +D PY C+ C +CV CP E
Sbjct: 62 AYAQRKGGGVKVDRSLCIRCGRCAEACPVDAVHMDGETGLPYV---CIHCGRCVAFCPHE 118
Query: 105 IISL 108
I L
Sbjct: 119 CIEL 122
Score = 57.0 bits (136), Expect = 4e-13
Identities = 46/163 (28%), Positives = 67/163 (41%), Gaps = 43/163 (26%)
Query: 227 EACPACGLCVESCPVEVISLEVEYASAK-PVTDEGLV---WSEEKCAYC--GPCAIKCPT 280
E C C C +C ++ + + +A +T G + + C C PCA CPT
Sbjct: 2 ERCIGCHACSLAC-ARLVHKRLSWVTAGIRITSAGGLSTGFEARLCLACDPAPCAQACPT 60
Query: 281 GAIKVVNPKGLELPSKKKTEKANEFAMCIRCGACAMKCPTGALKMGKMVHEGKEYARVEF 340
GA G+++ + ++CIRCG CA CP A+ M +G+
Sbjct: 61 GAYAQRKGGGVKV----------DRSLCIRCGRCAEACPVDAVHM-----DGETGL---- 101
Query: 341 SPALCNECGECVDVCPQKTLEL----------------TGDDK 367
P +C CG CV CP + +EL TGDDK
Sbjct: 102 -PYVCIHCGRCVAFCPHECIELVDQPVADAASDEAGRETGDDK 143
Score = 55.5 bits (132), Expect = 1e-12
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 15/102 (14%)
Query: 160 CIYC--TVCSQTCPWNAIFVAGKLPQKRQKTIKSFTVNEEECIGCEKCVEACPGSMIEYN 217
C+ C C+Q CP G Q++ +K V+ CI C +C EACP + +
Sbjct: 46 CLACDPAPCAQACP------TGAYAQRKGGGVK---VDRSLCIRCGRCAEACPVDAVHMD 96
Query: 218 GEKLGVKLPEACPACGLCVESCPVEVISLEVEYASAKPVTDE 259
GE LP C CG CV CP E I L V+ A +DE
Sbjct: 97 GE---TGLPYVCIHCGRCVAFCPHECIEL-VDQPVADAASDE 134
Score = 51.2 bits (121), Expect = 2e-11
Identities = 40/145 (27%), Positives = 61/145 (42%), Gaps = 37/145 (25%)
Query: 158 DKCIYCTVCSQTCPWNAIFVAGKLPQKRQKTIK-----------SFTVNEEECIGCE--K 204
++CI C CS C +L KR + S C+ C+
Sbjct: 2 ERCIGCHACSLAC--------ARLVHKRLSWVTAGIRITSAGGLSTGFEARLCLACDPAP 53
Query: 205 CVEACP-GSMIEYNGEKLGVKLPEA-CPACGLCVESCPVEVISLEVEYASAKPVTDEGLV 262
C +ACP G+ + G GVK+ + C CG C E+CPV+ + ++ E GL
Sbjct: 54 CAQACPTGAYAQRKGG--GVKVDRSLCIRCGRCAEACPVDAVHMDGE---------TGLP 102
Query: 263 WSEEKCAYCGPCAIKCPTGAIKVVN 287
+ C +CG C CP I++V+
Sbjct: 103 Y---VCIHCGRCVAFCPHECIELVD 124
Score = 46.2 bits (108), Expect = 6e-10
Identities = 37/143 (25%), Positives = 52/143 (36%), Gaps = 36/143 (25%)
Query: 197 EECIGCEKCVEACPGSMIE-YNGEKLGVKLPEA-----------CPAC--GLCVESCPVE 242
E CIGC C AC + + + G+++ A C AC C ++CP
Sbjct: 2 ERCIGCHACSLACARLVHKRLSWVTAGIRITSAGGLSTGFEARLCLACDPAPCAQACPTG 61
Query: 243 VISLEVEYASAKPVTDEGLVWSEEKCAYCGPCAIKCPTGAIKVVNPKGLELPSKKKTEKA 302
YA K G+ C CG CA CP A+ + GL
Sbjct: 62 A------YAQRK---GGGVKVDRSLCIRCGRCAEACPVDAVHMDGETGLPY--------- 103
Query: 303 NEFAMCIRCGACAMKCPTGALKM 325
+CI CG C CP +++
Sbjct: 104 ----VCIHCGRCVAFCPHECIEL 122
Score = 41.6 bits (96), Expect = 2e-08
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 16/88 (18%)
Query: 132 CVAC--GVCVPECPVDAISIEDIAVIDTDK--CIYCTVCSQTCPWNAIFVAGKLPQKRQK 187
C+AC C CP A + + D+ CI C C++ CP +A+ + G+
Sbjct: 46 CLACDPAPCAQACPTGAYAQRKGGGVKVDRSLCIRCGRCAEACPVDAVHMDGE------- 98
Query: 188 TIKSFTVNEEECIGCEKCVEACPGSMIE 215
T CI C +CV CP IE
Sbjct: 99 -----TGLPYVCIHCGRCVAFCPHECIE 121
Score = 40.4 bits (93), Expect = 3e-08
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 6/48 (12%)
Query: 3 GISIQEDACLVCNACAKACPTEAIEI-----APFKTCIQCFSCATACP 45
G+ + C+ C CA+ACP +A+ + P+ CI C C CP
Sbjct: 70 GVKVDRSLCIRCGRCAEACPVDAVHMDGETGLPY-VCIHCGRCVAFCP 116