Pairwise Alignments

Query, 222 a.a., HisA/HisF family protein from Methanococcus maripaludis S2

Subject, 247 a.a., 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) from Pseudomonas stutzeri RCH2

 Score = 66.6 bits (161), Expect = 4e-16
 Identities = 61/239 (25%), Positives = 105/239 (43%), Gaps = 32/239 (13%)

Query: 1   MEIIPVIDLMDGLAVSGKSGNRKEYVPIKSVLCDSSNPIDLITKYKENGAKKVYIADLNS 60
           M IIP IDL DG  V  + G   +          S +P+ +  K+ E G +++++ DLN 
Sbjct: 1   MLIIPAIDLKDGACVRLRQGLMDDATVF------SDDPVAMAAKWVEAGCRRLHLVDLNG 54

Query: 61  IM-GTGDNFEIVKNL-----DIFKIVDFGVTDKKDLEN-VKKYAEMTILGTETLNDISIL 113
              G   N E+V  +     D+   +  G+   + +E+ V+      I+GT+ + +   +
Sbjct: 55  AFEGQPVNGEVVTAIAKRYPDLPIQIGGGIRTLETIEHYVRAGVSYVIIGTKAVKEPGFV 114

Query: 114 KEE------NIILSLDFKDGKLLNYDLDEILS----------EIDKKTPLIILDISSVGT 157
            E        +I+ LD KDG +      E+ S          E D  + ++  DI+  G 
Sbjct: 115 TEACRAFPGKVIVGLDAKDGFVATDGWAEVSSVQAVDLARRFEADGVSAIVYTDIAKDGM 174

Query: 158 QKGINVELIKDILERTDNPIYIGGGIKSEDDLK---ISKELGISGVLIGTTIHNGKLDL 213
            +G NVE    +   +  P+   GGI +  D++    +   GI G + G  I+ G LD+
Sbjct: 175 MQGCNVEATVALANASRIPVIASGGIHNIGDIQKLLDTNTPGIVGAITGRAIYEGTLDV 233