Pairwise Alignments

Query, 222 a.a., HisA/HisF family protein from Methanococcus maripaludis S2

Subject, 245 a.a., 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase from Vibrio cholerae E7946 ATCC 55056

 Score = 48.1 bits (113), Expect = 1e-10
 Identities = 53/239 (22%), Positives = 101/239 (42%), Gaps = 39/239 (16%)

Query: 3   IIPVIDLMDGLAVSGKSGNRKEYVPIKSVLCDSSNPIDLITKYKENGAKKVYIADLNSIM 62
           IIP +DL++G  V    G+  +    K       +P +    Y + GA  +++ DL    
Sbjct: 2   IIPALDLIEGQVVRLYQGDYGQVTEYKV------DPAEQFNLYHQAGAGWLHLVDLTGAK 55

Query: 63  GTGDN-----FEIVKNLDIFKIVDFGVTDKKDLENVKKY-AEMTILGTETLNDISILKE- 115
            T          ++ +      +  GV  ++D+ ++ +  A+  ++G+  +    ++K  
Sbjct: 56  NTAARQLNLIARLLASTPANIQIGGGVRSEQDVVDLLEAGAQRVVVGSTAVKQPQLVKSW 115

Query: 116 ------ENIILSLDFK-----------------DGKLLNYDLDEILSEIDKKTPLIILDI 152
                 E I+L+LD                    G  +   +D+ L+       ++  DI
Sbjct: 116 IEKYGAEKIVLALDINIDEQGTRKVAISGWQEDSGVTIEALIDDYLTV--GLQHVLCTDI 173

Query: 153 SSVGTQKGINVELIKDILERTDNPIY-IGGGIKSEDDLKISKELGISGVLIGTTIHNGK 210
           S  GT  G NVEL +D+  +     +   GGI S  D++  K  G++GV++G  + +GK
Sbjct: 174 SRDGTLAGSNVELYRDLCRQYPQVQFQSSGGIGSLADIEALKGTGVAGVIVGRALLDGK 232



 Score = 40.8 bits (94), Expect = 2e-08
 Identities = 24/75 (32%), Positives = 38/75 (50%)

Query: 147 LIILDISSVGTQKGINVELIKDILERTDNPIYIGGGIKSEDDLKISKELGISGVLIGTTI 206
           L ++D++         + LI  +L  T   I IGGG++SE D+    E G   V++G+T 
Sbjct: 46  LHLVDLTGAKNTAARQLNLIARLLASTPANIQIGGGVRSEQDVVDLLEAGAQRVVVGSTA 105

Query: 207 HNGKLDLKKIIQKYG 221
                 +K  I+KYG
Sbjct: 106 VKQPQLVKSWIEKYG 120