Pairwise Alignments

Query, 333 a.a., RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5 from Methanococcus maripaludis S2

Subject, 308 a.a., tRNA pseudouridine synthase B (EC 4.2.1.70) from Xanthomonas campestris pv. campestris strain 8004

 Score = 86.7 bits (213), Expect = 7e-22
 Identities = 63/208 (30%), Positives = 93/208 (44%), Gaps = 35/208 (16%)

Query: 31  GLVVIDKPSGPTSHEVAAWVRNMLNLVKAGHGGTLDPKVTGALPVALGNTTKCVPIWHIP 90
           G++++DKP+G +S+      R +L   K GH G+LDP  TG LP+  G  TK   +    
Sbjct: 12  GILLLDKPAGLSSNNALQAARRLLRAEKGGHTGSLDPLATGLLPLCFGEATKIAGLLLGS 71

Query: 91  PKEYVCLMHL-----HDDAE-------------LVDIENIFKEFTGRIHQRPPLKAAVKR 132
            K Y   + L      DDA+                ++     F GRI Q+ P+ +A+K+
Sbjct: 72  AKAYDAEIVLGVTTDTDDADGQPLRERSVPALSEAALQAALAPFIGRIQQQAPIYSALKQ 131

Query: 133 -------SLRIRKIYEIEILEIDGRDIL----------FRTKCQSGTYLRKLVDDMGEAL 175
                    R  ++ E  + E++   I            R  C SGTY+R L  D+GE L
Sbjct: 132 GGEPLYAKARRGEVIEAPVREVEVHAITLTSYASPRLRLRVTCGSGTYIRSLARDLGEVL 191

Query: 176 GTSAHMQELRRTISGPFYENEAVYLQDL 203
           G  AH+  LRR    PF   E + L+ L
Sbjct: 192 GCGAHIAALRRVWVEPFRTPEMITLEAL 219