Pairwise Alignments

Query, 333 a.a., RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5 from Methanococcus maripaludis S2

Subject, 311 a.a., tRNA pseudouridine synthase B from Sinorhizobium meliloti 1021

 Score = 92.8 bits (229), Expect = 1e-23
 Identities = 66/211 (31%), Positives = 98/211 (46%), Gaps = 38/211 (18%)

Query: 30  TGLVVIDKPSGPTSHEVAAWVRNMLNLVKAGHGGTLDPKVTGALPVALGNTTKCVPIWHI 89
           +G +++DKP    S E  + ++ +    KAGH GTLDP  +G LP+ALG+ TK VP    
Sbjct: 13  SGWLILDKPLDFGSTEAVSKIKWLFKAQKAGHAGTLDPLASGMLPIALGDATKTVPYVMD 72

Query: 90  PPKEYVCLMHLHDDAELVDIEN-----------------IFKEFTGRIHQRPPLKAAVKR 132
             K Y   +   ++    D+E                  +  ++TG I Q PP  +A+K 
Sbjct: 73  GRKIYEFTVAWGEERSTDDLEGEAVRSSAARPEEEAIRALLPKYTGVIAQVPPQFSAIK- 131

Query: 133 SLRIRKIYEI----EILEIDGRDI---------------LFRTKCQSGTYLRKLVDDMGE 173
            +   + Y++    E +EI  R++                F  +C  GTY+R L  DMG 
Sbjct: 132 -IGGERAYDLARDGETVEIPAREVEVFRLSLIGSAPNLAHFEIECGKGTYVRSLARDMGR 190

Query: 174 ALGTSAHMQELRRTISGPFYENEAVYLQDLL 204
            LG   H+  LRRT   PF E + V L DL+
Sbjct: 191 DLGCFGHIASLRRTFVAPFGEEDMVPLADLV 221