Pairwise Alignments

Query, 333 a.a., RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5 from Methanococcus maripaludis S2

Subject, 298 a.a., Probable tRNA pseudouridine synthase B TruB (tRNA pseudouridine 55 synthase) (PSI55 synthase) (pseudouridylate synthase) (uracil hydrolyase) from Mycobacterium tuberculosis H37Rv

 Score = 97.1 bits (240), Expect = 5e-25
 Identities = 70/214 (32%), Positives = 98/214 (45%), Gaps = 39/214 (18%)

Query: 31  GLVVIDKPSGPTSHEVAAWVRNMLNLVKAGHGGTLDPKVTGALPVALGNTTKCVPIWHIP 90
           G+VVIDKP+G TSH+V    R +    + GH GTLDP  TG L + +   TK + +    
Sbjct: 7   GIVVIDKPAGMTSHDVVGRCRRIFATRRVGHAGTLDPMATGVLVIGIERATKILGLLTAA 66

Query: 91  PKEYVCLMHL-----HDDAE-------------LVDIENIFKEFTGRIHQRPPLKAAVK- 131
           PK Y   + L      +DAE             +  I+   +   G I Q P   +A+K 
Sbjct: 67  PKSYAATIRLGQTTSTEDAEGQVLQSVPAKHLTIEAIDAAMERLRGEIRQVPSSVSAIKV 126

Query: 132 ------------RSLRIR----KIYEIEILEIDGRDILF----RTKCQSGTYLRKLVDDM 171
                       RS+++     +I   E+L    RD L        C SGTY+R L  D+
Sbjct: 127 GGRRAYRLARQGRSVQLEARPIRIDRFELLAARRRDQLIDIDVEIDCSSGTYIRALARDL 186

Query: 172 GEALGTSAHMQELRRTISGPFYENEAVYLQDLLD 205
           G+ALG   H+  LRRT  G F  ++A  L DL +
Sbjct: 187 GDALGVGGHVTALRRTRVGRFELDQARSLDDLAE 220