Pairwise Alignments

Query, 333 a.a., RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5 from Methanococcus maripaludis S2

Subject, 311 a.a., tRNA pseudouridine synthase B from Burkholderia phytofirmans PsJN

 Score = 96.7 bits (239), Expect = 7e-25
 Identities = 78/264 (29%), Positives = 115/264 (43%), Gaps = 46/264 (17%)

Query: 31  GLVVIDKPSGPTSHEVAAWVRNMLNLVKAGHGGTLDPKVTGALPVALGNTTKCVPIWHIP 90
           G++++DKP G +S++     + +    KAGH GTLDP  TG LP+  G  TK        
Sbjct: 16  GVLLLDKPLGLSSNDALIRAKRLYLAKKAGHTGTLDPLATGLLPLCFGEATKFSQDLLEA 75

Query: 91  PKEYVCLMHL-------HDDAELVDIENI----------FKEFTGRIHQRPPLKAAVKRS 133
            K Y   M L         + E +D   +             F G I Q PP+ +A+KR 
Sbjct: 76  NKTYEATMRLGVRTTTGDAEGEAIDTREVTCDEAAILAVLPTFLGEITQVPPMYSALKRD 135

Query: 134 LRIRKIYEI----EILEIDGR---------------DILFRTKCQSGTYLRKLVDDMGEA 174
            +   +YE     + +E +GR               D+ FR  C  GTY+R L +D+GEA
Sbjct: 136 GK--PLYEYARAGQTVEREGRQVTILALEMLACALPDVTFRVTCSKGTYVRTLAEDIGEA 193

Query: 175 LGTSAHMQELRRTISGPFYENEAVYLQDLLDAYIFWKEDGNEEELRKIVKPLEYGLQHLK 234
           LG  AH+  LRRT  G    + +V L  L DA         E E    ++P++  L    
Sbjct: 194 LGCGAHLVALRRTGVGALTLDNSVTLDALSDA--------AESERDAWLQPVDALLSTFP 245

Query: 235 KIIIKDSAVDAVCHGATLYSSGIS 258
            + + + A     HG  L  S ++
Sbjct: 246 LVRLNEDATRRFLHGQRLKLSELT 269