Pairwise Alignments

Query, 546 a.a., type II/IV secretion system ATPase subunit from Methanococcus maripaludis S2

Subject, 483 a.a., General secretion pathway protein E from Pseudomonas fluorescens FW300-N2E2

 Score = 58.5 bits (140), Expect = 5e-13
 Identities = 48/122 (39%), Positives = 62/122 (50%), Gaps = 18/122 (14%)

Query: 296 IFICGETASGKTTSLNAILPFIKPKSK-IFSCEDTSEVKPPN----PVWQQL-LTRERGP 349
           + + G T SGKTTSL A L  I  +S+ I + ED  E   P     PV  ++ +T  RG 
Sbjct: 241 VLVTGPTGSGKTTSLYAALSSINDQSRNILTVEDPIEYHLPGIGQMPVNPKVDMTFARG- 299

Query: 350 EESRVTLFDLLRAALRSRPNYIIVGEIRSVEGA-VAFQAMQTGHPVISTFHAANVRKMIQ 408
                     LRA LR  P+ ++VGEIR  E A +A QA  TGH V+ST H       + 
Sbjct: 300 ----------LRAILRQDPDVVMVGEIRDRETAEIAVQASLTGHLVLSTLHTNTAVGAVT 349

Query: 409 RL 410
           RL
Sbjct: 350 RL 351