Pairwise Alignments

Query, 546 a.a., type II/IV secretion system ATPase subunit from Methanococcus maripaludis S2

Subject, 397 a.a., twitching motility protein from Synechococcus elongatus PCC 7942

 Score = 62.4 bits (150), Expect = 3e-14
 Identities = 56/176 (31%), Positives = 89/176 (50%), Gaps = 15/176 (8%)

Query: 238 DGSRINILYSGDVSLKGPSFTIRKFTDVPISITQIISWGTMSAQTAAYLWLCLEYGMSIF 297
           D +R+ I   G  SL+GPS  +R    +P+   +I+S   +S     +  +C      + 
Sbjct: 122 DFARVRINIFG--SLRGPSMVMRL---IPL---RILSLDELSLPPV-FRDICYYPKGLVL 172

Query: 298 ICGETASGKTTSLNAILPFIKPK--SKIFSCEDTSEVKPPNPVWQQLLTRERGPEESRVT 355
           + G T SGK+T+L A++ FI  +    I + ED  E    +   Q+ L ++R        
Sbjct: 173 VTGPTGSGKSTTLAAMIDFINQEMAKNIITIEDPIEFVHQS---QRSLIKQREVGVHTRQ 229

Query: 356 LFDLLRAALRSRPNYIIVGEIRSVEGA-VAFQAMQTGHPVISTFHAANVRKMIQRL 410
               LRA+LR  P+ I+VGE+R  E    A +A QTGH V++T H  +  K I+R+
Sbjct: 230 FEAALRASLREDPDIILVGELRDRETINTALKAAQTGHLVMATLHTNSAVKTIERV 285