Pairwise Alignments

Query, 546 a.a., type II/IV secretion system ATPase subunit from Methanococcus maripaludis S2

Subject, 362 a.a., twitching motility protein from Synechococcus elongatus PCC 7942

 Score = 58.9 bits (141), Expect = 3e-13
 Identities = 41/120 (34%), Positives = 63/120 (52%), Gaps = 10/120 (8%)

Query: 296 IFICGETASGKTTSLNAILPFIKPK--SKIFSCEDTSEVKPPNPVWQ--QLLTRERGPEE 351
           I + G T SGKTT+L A++  I       I + ED  E      V+Q  + +  +R   E
Sbjct: 128 ILVTGPTGSGKTTTLAAVIELINRSRAEHIITVEDPIEF-----VYQPAKSIIHQRQLGE 182

Query: 352 SRVTLFDLLRAALRSRPNYIIVGEIRSVEG-AVAFQAMQTGHPVISTFHAANVRKMIQRL 410
              +  + LRAALR  P+ I+VGE+R +E   +A  A +TGH V  T H ++  + + R+
Sbjct: 183 DTKSFANALRAALREDPDIILVGEMRDLETIQLAITAAETGHLVFGTLHTSSAAQTVDRI 242