Pairwise Alignments

Query, 546 a.a., type II/IV secretion system ATPase subunit from Methanococcus maripaludis S2

Subject, 466 a.a., pilus assembly protein from Sinorhizobium meliloti 1021

 Score =  147 bits (372), Expect = 7e-40
 Identities = 94/286 (32%), Positives = 159/286 (55%), Gaps = 8/286 (2%)

Query: 129 EKKKGILSKITDSGKININKSERDKFLYLLKRDLIGLGTLEPIKRDPYIEDIHVIGAKNC 188
           E+ + I++ I       ++ SE+++ L  +  D++G G LEP+     I DI V GA   
Sbjct: 74  EEIRDIVNDIITIKNFAMSISEQEELLDDICNDVLGYGPLEPLLARDDIADIMVNGAGQI 133

Query: 189 --QLVHKIYDMLPSNIEWEDEGDISNYLKNMCERIGRPVSDATPIVDGSLPDGSRINILY 246
             ++  K+ +   S I + D G + +  + +  ++GR V +++PI D  LPDGSR+N++ 
Sbjct: 134 FIEVGGKVEE---SEIRFRDNGQLLSICQRIVSQVGRRVDESSPICDARLPDGSRVNVI- 189

Query: 247 SGDVSLKGPSFTIRKFTDVPISITQIISWGTMSAQTAAYLWLCLEYGMSIFICGETASGK 306
           +  +++ G + TIRKF    +++ Q++ +G+++ + A  L +      +I I G T SGK
Sbjct: 190 APPLAIDGTALTIRKFKKDKLTLEQLVRFGSITPEAAVLLQIIGRVRCNIVISGGTGSGK 249

Query: 307 TTSLNAILPFIKPKSKIFSCEDTSEVKPPNPVWQQLLTRERGPE-ESRVTLFDLLRAALR 365
           TT LN +  +I    +I +CED++E++   P   +L TR    E E  +T+ DL++  LR
Sbjct: 250 TTLLNCLTRYIDSTERIITCEDSAELQLQQPHVVRLETRPPNIEGEGEITMRDLVKNCLR 309

Query: 366 SRPNYIIVGEIRSVEGAVAFQAMQTGHP-VISTFHAANVRKMIQRL 410
            RP  IIVGE+R  E     QAM TGH   + T HA   R+ + R+
Sbjct: 310 MRPERIIVGEVRGPEVFDLLQAMNTGHDGSMGTIHANTPRECLSRM 355