Pairwise Alignments

Query, 546 a.a., type II/IV secretion system ATPase subunit from Methanococcus maripaludis S2

Subject, 326 a.a., type II secretion system protein E (NCBI) from Rhodospirillum rubrum S1H

 Score = 83.2 bits (204), Expect = 1e-20
 Identities = 75/251 (29%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 209 DISNYLKNMCERIGRPVSDATPIVDGSLPD-GSRINILYSGDVSLKGPSFTIRKFTDVPI 267
           D    ++ +   +G  V   +P V   LP+ G R   L    V+   P+F IRK      
Sbjct: 66  DGERIVRLVAHHVGAEVHANSPRVSTELPETGERFEGLLPPVVA--APAFAIRKPAVAVF 123

Query: 268 SITQIISWGTMSAQTAAYLWLCLEYGMSIFICGETASGKTTSLNAILPFI-KPKSKIFSC 326
           +    +  G M+A+ AA L   +    +I + G T++GKTT  NA+L  + K   ++   
Sbjct: 124 TFDDYVVAGIMTAEQAAVLRHAVATRRNILVAGGTSTGKTTLTNALLTEVAKTTDRVVLI 183

Query: 327 EDTSEVKPPNPVWQQLLTRERGPEESRVTLFDLLRAALRSRPNYIIVGEIRSVEGAVAFQ 386
           EDT E++        L T+E        +L DL+R++LR RP+ I +GE+R  E     +
Sbjct: 184 EDTRELQCRTQNLVALRTKE-----GIASLSDLVRSSLRLRPDRIPIGEVRGAEALDLLK 238

Query: 387 AMQTGHP-VISTFHAAN----VRKMIQRLTGDPICIPQTFMDNLNVCLFQLAVYARGKFL 441
           A  TGHP  I T HA      +R++ Q +    I +P+  +      +  LA   RG+  
Sbjct: 239 AWGTGHPGGIGTIHAGTALGALRRLEQLIQEAVITVPKALIAETITVVAVLA--GRGR-Q 295

Query: 442 RRVVSVEEIEG 452
           RR++ + EI G
Sbjct: 296 RRLIELAEIAG 306