Pairwise Alignments

Query, 546 a.a., type II/IV secretion system ATPase subunit from Methanococcus maripaludis S2

Subject, 688 a.a., type II secretion system protein E (NCBI) from Rhodospirillum rubrum S1H

 Score = 64.7 bits (156), Expect = 1e-14
 Identities = 43/117 (36%), Positives = 64/117 (54%), Gaps = 8/117 (6%)

Query: 296 IFICGETASGKTTSLNAILPFIK-PKSKIFSCEDTSEVKPPNPVWQQLLTRERGPEESRV 354
           + + G T SGKTT+L A++  I  P+  I + ED  E   P      LL + +  E +R+
Sbjct: 440 LLVTGPTGSGKTTTLYALMDHISGPEITIVTLEDPVEYDLP------LLRQTQVREGARL 493

Query: 355 TLFDLLRAALRSRPNYIIVGEIRSVE-GAVAFQAMQTGHPVISTFHAANVRKMIQRL 410
              D +RA LR  P+ ++VGEIR  +  A+A +A  TGH V +T HA +    + RL
Sbjct: 494 GFADGIRALLRQDPDVMLVGEIRDADTAAMALRAAMTGHQVYATLHANDAPSALPRL 550