Pairwise Alignments

Query, 546 a.a., type II/IV secretion system ATPase subunit from Methanococcus maripaludis S2

Subject, 523 a.a., general secretory pathway protein E (RefSeq) from Shewanella loihica PV-4

 Score = 57.8 bits (138), Expect = 1e-12
 Identities = 45/117 (38%), Positives = 60/117 (51%), Gaps = 8/117 (6%)

Query: 296 IFICGETASGKTTSLNAILPFIKP-KSKIFSCEDTSEVKPPNPVWQQLLTRERGPEESRV 354
           I + G T SGK+T+L A L  I    + I + ED  E + P     Q+ T+        +
Sbjct: 280 ILVTGPTGSGKSTTLYAGLTEINAIDTNILTVEDPIEYELPGIGQTQVNTKVD------M 333

Query: 355 TLFDLLRAALRSRPNYIIVGEIRSVEGA-VAFQAMQTGHPVISTFHAANVRKMIQRL 410
           T    LRA LR  P+ +++GEIR +E A +A QA  TGH VIST H       I RL
Sbjct: 334 TFARGLRAILRQDPDVVMIGEIRDLETAQIAVQASLTGHLVISTLHTNTASGAITRL 390