Pairwise Alignments

Query, 546 a.a., type II/IV secretion system ATPase subunit from Methanococcus maripaludis S2

Subject, 569 a.a., type IV-A pilus assembly ATPase PilB (RefSeq) from Shewanella loihica PV-4

 Score = 57.4 bits (137), Expect = 1e-12
 Identities = 42/117 (35%), Positives = 62/117 (52%), Gaps = 8/117 (6%)

Query: 296 IFICGETASGKTTSLNAILPFIKPKSK-IFSCEDTSEVKPPNPVWQQLLTRERGPEESRV 354
           I + G T SGKT SL   L  +  + + I + ED  E+     V Q  +  + G     +
Sbjct: 324 ILVTGPTGSGKTVSLYTGLNILNTEERNISTAEDPVEINLEG-VNQVHINLKAG-----L 377

Query: 355 TLFDLLRAALRSRPNYIIVGEIRSVEGA-VAFQAMQTGHPVISTFHAANVRKMIQRL 410
           T    LR+ LR  P+ ++VGEIR +E A +A +A QTGH V+ST H  +  + + RL
Sbjct: 378 TFASALRSFLRQDPDVVMVGEIRDLETAEIAIKAAQTGHLVLSTLHTNSAAETLTRL 434